Nickel in PDB 9ofx: Crystal Structure of C-Src SH3 Domain in H32 Space Group Mediated By Nickel

All present enzymatic activity of Crystal Structure of C-Src SH3 Domain in H32 Space Group Mediated By Nickel:
2.7.10.2;

The structure of Crystal Structure of C-Src SH3 Domain in H32 Space Group Mediated By Nickel, PDB code: 9ofx was solved by A.L.Stiegler, X.Calicdan, B.H.Ha, O.S.Fisher, T.J.Boggon, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	31.89 / 1.45
Space group	H 3 2
Cell size a, b, c (Å), α, β, γ (°)	63.77, 63.77, 271.71, 90, 90, 120
R / Rfree (%)	16.3 / 19.6

The binding sites of Nickel atom in the Crystal Structure of C-Src SH3 Domain in H32 Space Group Mediated By Nickel (pdb code 9ofx). This binding sites where shown within 5.0 Angstroms radius around Nickel atom.
In total 2 binding sites of Nickel where determined in the Crystal Structure of C-Src SH3 Domain in H32 Space Group Mediated By Nickel, PDB code: 9ofx:
Jump to Nickel binding site number: 1; 2;

Nickel binding site 1 out of 2 in the Crystal Structure of C-Src SH3 Domain in H32 Space Group Mediated By Nickel


Mono view


Stereo pair view

A full contact list of Nickel with other atoms in the Ni binding site number 1 of Crystal Structure of C-Src SH3 Domain in H32 Space Group Mediated By Nickel within 5.0Å range: probe atom residue distance (Å) B Occ A:Ni201 b:27.2 occ:1.00 O A:HOH316 2.0 30.6 1.0 O A:HOH321 2.0 33.7 1.0 O A:HOH302 2.0 28.7 1.0 N A:GLY85 2.0 28.1 1.0 O A:GLY85 2.0 26.0 1.0 NE2 B:HIS125 2.0 26.3 1.0 C A:GLY85 2.7 27.1 1.0 CA A:GLY85 2.9 28.1 1.0 CE1 B:HIS125 2.9 28.5 1.0 CD2 B:HIS125 3.1 25.5 1.0 N A:VAL86 4.0 28.0 1.0 ND1 B:HIS125 4.1 24.4 1.0 CG B:HIS125 4.2 23.7 1.0 O B:SER126 4.5 32.1 1.0 CA B:GLY130 4.6 34.4 1.0 CA A:VAL86 4.7 26.9 1.0 CG2 A:THR87 4.8 31.4 0.5 C A:VAL86 4.8 27.3 1.0 O B:GLY130 5.0 35.3 1.0

Nickel binding site 2 out of 2 in the Crystal Structure of C-Src SH3 Domain in H32 Space Group Mediated By Nickel


Mono view


Stereo pair view

A full contact list of Nickel with other atoms in the Ni binding site number 2 of Crystal Structure of C-Src SH3 Domain in H32 Space Group Mediated By Nickel within 5.0Å range: probe atom residue distance (Å) B Occ B:Ni201 b:22.0 occ:1.00 O B:GLY85 2.0 23.7 1.0 O B:HOH316 2.0 30.3 1.0 N B:GLY85 2.0 25.9 1.0 O B:HOH312 2.0 27.3 1.0 O B:HOH313 2.0 22.1 1.0 NE2 A:HIS125 2.0 22.1 1.0 C B:GLY85 2.7 23.5 1.0 CA B:GLY85 2.8 26.8 1.0 CE1 A:HIS125 3.0 22.7 1.0 CD2 A:HIS125 3.0 20.1 1.0 N B:VAL86 4.0 25.2 0.4 N B:VAL86 4.0 25.4 0.6 O1 B:GOL202 4.0 47.1 1.0 ND1 A:HIS125 4.1 21.6 1.0 CG A:HIS125 4.1 18.9 1.0 O3 B:GOL202 4.2 33.1 1.0 O C:HOH334 4.3 36.4 1.0 CA A:GLY130 4.3 21.3 1.0 C3 B:GOL202 4.4 56.4 1.0 O A:SER126 4.5 20.4 1.0 C B:VAL86 4.6 22.9 0.6 O C:HOH309 4.7 47.1 1.0 CA B:VAL86 4.7 25.4 0.4 CA B:VAL86 4.7 25.2 0.6 C B:VAL86 4.7 24.4 0.4 O B:VAL86 4.8 24.8 0.6 C2 B:GOL202 4.8 57.6 1.0 OG1 B:THR87 4.9 26.2 0.4 O A:GLY130 4.9 24.5 1.0 N B:THR87 4.9 24.3 0.6 C1 B:GOL202 4.9 52.5 1.0 CD2 A:LEU127 5.0 26.3 1.0 O B:VAL86 5.0 26.3 0.4

X.Calicdan, O.S.Fisher, B.H.Ha, T.J.Boggon, A.L.Stiegler. Crystal Structure of C-Src SH3 Domain in H32 Space Group Mediated By Nickel To Be Published.