error » Nickel » PDB 1fwc-1j6p » 1jhj
error »
  Nickel »
    PDB 1fwc-1j6p »
      1jhj »

Nickel in PDB 1jhj: Crystal Structure of the APC10/DOC1 Subunit of the Human Anaphase- Promoting Complex

Protein crystallography data

The structure of Crystal Structure of the APC10/DOC1 Subunit of the Human Anaphase- Promoting Complex, PDB code: 1jhj was solved by K.S.Wendt, H.C.Vodermaier, U.Jacob, C.Gieffers, M.Gmachl, J.-M.Peters, R.Huber, P.Sondermann, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 19.93 / 1.60
Space group P 6 2 2
Cell size a, b, c (Å), α, β, γ (°) 97.664, 97.664, 67.769, 90.00, 90.00, 120.00
R / Rfree (%) 20.9 / 24.4

Nickel Binding Sites:

The binding sites of Nickel atom in the Crystal Structure of the APC10/DOC1 Subunit of the Human Anaphase- Promoting Complex (pdb code 1jhj). This binding sites where shown within 5.0 Angstroms radius around Nickel atom.
In total only one binding site of Nickel was determined in the Crystal Structure of the APC10/DOC1 Subunit of the Human Anaphase- Promoting Complex, PDB code: 1jhj:

Nickel binding site 1 out of 1 in 1jhj

Go back to Nickel Binding Sites List in 1jhj
Nickel binding site 1 out of 1 in the Crystal Structure of the APC10/DOC1 Subunit of the Human Anaphase- Promoting Complex


Mono view


Stereo pair view

A full contact list of Nickel with other atoms in the Ni binding site number 1 of Crystal Structure of the APC10/DOC1 Subunit of the Human Anaphase- Promoting Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ni320

b:35.6
occ:1.00
O A:HOH464 1.8 28.4 1.0
O A:ALA2 2.1 30.8 1.0
N A:ALA2 2.1 39.4 1.0
O A:HOH427 2.2 41.8 1.0
O A:HOH404 2.2 41.2 1.0
C A:ALA2 2.8 32.3 1.0
CA A:ALA2 2.9 35.1 1.0
CB A:ALA2 3.6 31.7 1.0
O A:HOH470 3.8 52.9 1.0
N A:THR3 4.1 30.0 1.0
O A:HOH468 4.2 63.3 1.0
O A:HOH471 4.2 58.5 1.0
O A:HOH406 4.2 53.5 1.0
CD A:PRO4 4.7 29.2 1.0
O A:HOH376 4.8 60.0 1.0
CA A:THR3 4.9 28.5 1.0

Reference:

K.S.Wendt, H.C.Vodermaier, U.Jacob, C.Gieffers, M.Gmachl, J.M.Peters, R.Huber, P.Sondermann. Crystal Structure of the APC10/DOC1 Subunit of the Human Anaphase-Promoting Complex. Nat.Struct.Biol. V. 8 784 2001.
ISSN: ISSN 1072-8368
PubMed: 11524682
DOI: 10.1038/NSB0901-784
Page generated: Fri Sep 25 07:55:56 2020
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy