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Nickel in PDB 3c2q: Crystal Structure of Conserved Putative Lor/Sdh Protein From Methanococcus Maripaludis S2

Protein crystallography data

The structure of Crystal Structure of Conserved Putative Lor/Sdh Protein From Methanococcus Maripaludis S2, PDB code: 3c2q was solved by N.Duke, M.Gu, R.Mulligan, B.Conrad, A.Joachimiak, Midwest Centerfor Structural Genomics (Mcsg), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 96.23 / 2.00
Space group P 41 21 2
Cell size a, b, c (Å), α, β, γ (°) 119.592, 119.592, 161.737, 90.00, 90.00, 90.00
R / Rfree (%) 19.1 / 21.7

Nickel Binding Sites:

The binding sites of Nickel atom in the Crystal Structure of Conserved Putative Lor/Sdh Protein From Methanococcus Maripaludis S2 (pdb code 3c2q). This binding sites where shown within 5.0 Angstroms radius around Nickel atom.
In total only one binding site of Nickel was determined in the Crystal Structure of Conserved Putative Lor/Sdh Protein From Methanococcus Maripaludis S2, PDB code: 3c2q:

Nickel binding site 1 out of 1 in 3c2q

Go back to Nickel Binding Sites List in 3c2q
Nickel binding site 1 out of 1 in the Crystal Structure of Conserved Putative Lor/Sdh Protein From Methanococcus Maripaludis S2


Mono view


Stereo pair view

A full contact list of Nickel with other atoms in the Ni binding site number 1 of Crystal Structure of Conserved Putative Lor/Sdh Protein From Methanococcus Maripaludis S2 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ni500

b:75.1
occ:1.00
O A:SER388 3.3 39.9 1.0
N A:ALA390 3.7 33.1 1.0
O A:ALA390 3.7 31.1 1.0
CA A:GLN389 3.9 36.5 1.0
C A:SER388 4.3 39.8 1.0
C A:GLN389 4.3 35.0 1.0
N A:GLN389 4.6 37.8 1.0
C A:ALA390 4.6 31.2 1.0
CA A:ALA390 4.7 31.9 1.0
CB A:GLN389 4.8 36.9 1.0

Reference:

N.Duke, M.Gu, R.Mulligan, B.Conrad, A.Joachimiak. Crystal Structure of Conserved Putative Lor/Sdh Protein From Methanococcus Maripaludis S2 To Be Published.
Page generated: Thu Oct 29 06:19:19 2020
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