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Nickel in PDB 3iii: 1.95 Angstrom Crystal Structure of Coce/Nond Family Hydrolase (SACOL2612) From Staphylococcus Aureus

Protein crystallography data

The structure of 1.95 Angstrom Crystal Structure of Coce/Nond Family Hydrolase (SACOL2612) From Staphylococcus Aureus, PDB code: 3iii was solved by T.Osinski, M.Chruszcz, M.J.Domagalski, M.Cymborowski, I.A.Shumilin, T.Skarina, O.Onopriyenko, M.D.Zimmerman, A.Savchenko, A.Edwards, W.F.Anderson, W.Minor, Center For Structural Genomics Of Infectiousdiseases (Csgid), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 42.14 / 1.95
Space group P 41 21 2
Cell size a, b, c (Å), α, β, γ (°) 74.498, 74.498, 210.681, 90.00, 90.00, 90.00
R / Rfree (%) 14.5 / 18.3

Nickel Binding Sites:

The binding sites of Nickel atom in the 1.95 Angstrom Crystal Structure of Coce/Nond Family Hydrolase (SACOL2612) From Staphylococcus Aureus (pdb code 3iii). This binding sites where shown within 5.0 Angstroms radius around Nickel atom.
In total only one binding site of Nickel was determined in the 1.95 Angstrom Crystal Structure of Coce/Nond Family Hydrolase (SACOL2612) From Staphylococcus Aureus, PDB code: 3iii:

Nickel binding site 1 out of 1 in 3iii

Go back to Nickel Binding Sites List in 3iii
Nickel binding site 1 out of 1 in the 1.95 Angstrom Crystal Structure of Coce/Nond Family Hydrolase (SACOL2612) From Staphylococcus Aureus


Mono view


Stereo pair view

A full contact list of Nickel with other atoms in the Ni binding site number 1 of 1.95 Angstrom Crystal Structure of Coce/Nond Family Hydrolase (SACOL2612) From Staphylococcus Aureus within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ni561

b:11.1
occ:0.30
NE2 A:HIS15 1.8 2.0 1.0
O A:HOH1011 1.9 18.0 1.0
O A:HOH1009 1.9 14.1 1.0
O A:HOH1122 1.9 33.0 1.0
O A:HOH1010 2.0 15.7 1.0
CD2 A:HIS15 2.6 6.5 1.0
CE1 A:HIS15 3.0 4.9 1.0
CG A:HIS15 3.9 7.5 1.0
ND1 A:HIS15 3.9 12.5 1.0
O A:HOH755 4.2 8.9 1.0
O A:VAL13 4.5 5.5 1.0
OG1 A:THR12 4.7 13.0 1.0

Reference:

T.Osinski, M.Chruszcz, M.J.Domagalski, M.Cymborowski, I.A.Shumilin, T.Skarina, O.Onopriyenko, M.D.Zimmerman, A.Savchenko, A.Edwards, W.F.Anderson, W.Minor, Center For Structural Genomics Of Infectious Diseases(Csgid). 1.95 Angstrom Crystal Structure of Coce/Nond Family Hydrolase (SACOL2612) From Staphylococcus Aureus To Be Published.
Page generated: Fri Sep 25 08:25:17 2020
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