Nickel in PDB, part 13 (files: 481-520),
PDB 3hy4-3kvb
Experimental structures of coordination spheres of Nickel (Ni) in bioorganic
molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius
around Nickel atoms. PDB files: 481-520 (PDB 3hy4-3kvb).
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3hy4 (Ni: 1) - Structure of Human Mthfs with N5-Iminium Phosphate
Other atoms:
Mg (3);
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3hy6 (Ni: 3) - Structure of Human Mthfs with Adp
Other atoms:
Mg (12);
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3i01 (Ni: 8) - Native Structure of Bifunctional Carbon Monoxide Dehydrogenase/Acetyl-Coa Synthase From Moorella Thermoacetica, Water-Bound C-Cluster.
Other atoms:
Fe (56);
Cu (4);
Na (4);
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3i04 (Ni: 8) - Cyanide-Bound Structure of Bifunctional Carbon Monoxide Dehydrogenase/Acetyl-Coa Synthase From Moorella Thermoacetica, Cyanide-Bound C-Cluster
Other atoms:
Fe (56);
Cu (4);
Na (4);
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3i0o (Ni: 1) - Crystal Structure of Spectinomycin Phosphotransferase, Aph(9)-Ia, in Complex with Adp and Spectinomcyin
Other atoms:
Mg (1);
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3i0q (Ni: 1) - Crystal Structure of the Amp-Bound Complex of Spectinomycin Phosphotransferase, Aph(9)-Ia
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3i2b (Ni: 12) - The Crystal Structure of Human 6 Pyruvoyl Tetrahydrobiopterin Synthase
Other atoms:
Mg (2);
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3i39 (Ni: 1) - Ni,Fe-Codh-320 Mv+Cn State
Other atoms:
Fe (11);
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3iar (Ni: 1) - The Crystal Structure of Human Adenosine Deaminase
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3ib3 (Ni: 1) - Crystal Structure of SACOL2612 - Coce/Nond Family Hydrolase From Staphylococcus Aureus
Other atoms:
Cl (4);
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3idq (Ni: 1) - Crystal Structure of S. Cerevisiae GET3 at 3.7 Angstrom Resolution
Other atoms:
Zn (1);
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3iga (Ni: 1) - Potassium Channel Kcsa-Fab Complex in Li+ and K+
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3iht (Ni: 2) - Crystal Structure of S-Adenosyl-L-Methionine Methyl Transferase (YP_165822.1) From Silicibacter Pomeroyi Dss-3 at 1.80 A Resolution
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3ii2 (Ni: 3) - Structure of ORF157 From Acidianus Filamentous Virus 1
Other atoms:
Hg (2);
Cl (3);
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3ii3 (Ni: 2) - Structure of ORF157 From Acidianus Filamentous Virus 1
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3iii (Ni: 1) - 1.95 Angstrom Crystal Structure of Coce/Nond Family Hydrolase (SACOL2612) From Staphylococcus Aureus
Other atoms:
Cl (4);
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3ile (Ni: 1) - Crystal Structure of ORF157-E86A of Acidianus Filamentous Virus 1
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3imp (Ni: 2) - New Crystal Form of the C-Terminal Domain of Helicobacter Pylori Motb (Residues 125-256)
Other atoms:
Cl (4);
-
3inc (Ni: 2) - Crystal Structure of Human Insulin with Ni+2 Complex
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3iu8 (Ni: 3) - M. Tuberculosis Methionine Aminopeptidase with Ni Inhibitor T03
Other atoms:
F (1);
Cl (2);
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3iu9 (Ni: 2) - M. Tuberculosis Methionine Aminopeptidase with Ni Inhibitor T07
Other atoms:
Cl (3);
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3iv8 (Ni: 4) - N-Acetylglucosamine-6-Phosphate Deacetylase From Vibrio Cholerae Complexed with Fructose 6-Phosphate
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3iwf (Ni: 2) - The Crystal Structure of the N-Terminal Domain of A Rpir Transcriptional Regulator From Staphylococcus Epidermidis to 1.4A
Other atoms:
Cl (2);
Na (1);
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3k0h (Ni: 1) - The Crystal Structure of BRCA1 Brct in Complex with A Minimal Recognition Tetrapeptide with An Amidated C-Terminus
Other atoms:
Cl (1);
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3k0k (Ni: 1) - Crystal Structure of BRCA1 Brct in Complex with A Minimal Recognition Tetrapeptide with A Free Carboxy C-Terminus.
Other atoms:
Cl (1);
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3k15 (Ni: 1) - Crystal Structure of BRCA1 Brct D1840T in Complex with A Minimal Recognition Tetrapeptide with An Amidated C-Terminus
Other atoms:
Cl (1);
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3k16 (Ni: 1) - Crystal Structure of BRCA1 Brct D1840T in Complex with A Minimal Recognition Tetrapeptide with A Free Carboxy C-Terminus
Other atoms:
Cl (1);
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3k2i (Ni: 2) - Human Acyl-Coenzyme A Thioesterase 4
Other atoms:
Cl (3);
-
3k2o (Ni: 2) - Structure of An Oxygenase
Other atoms:
Cl (6);
Na (2);
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3k4z (Ni: 1) - Crystal Structure of the Cellulosomal CBM4 From Clostridium Thermocellum Cellulase Cbha
Other atoms:
Mg (2);
-
3k6l (Ni: 3) - The Structure of E.Coli Peptide Deformylase (Pdf) in Complex with Peptidomimetic Ligand BB2827
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3k9u (Ni: 1) - Crystal Structure of Paia Acetyltransferase (TA0374) From Thermoplasma Acidophilum
Other atoms:
Br (1);
Cl (3);
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3kbn (Ni: 3) - Room Temperature Structure of D-Xylose Isomerase in Complex with 2NI(2+) Co-Factors and D12-D-Glucose in the Linear Form
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3kbr (Ni: 1) - The Crystal Structure of Cyclohexadienyl Dehydratase Precursor From Pseudomonas Aeruginosa PA01
Other atoms:
Cl (1);
-
3kbv (Ni: 2) - Room Temperature Structure of D-Xylose Isomerase in Complex with 2NI(2+) Co-Factors
-
3kbw (Ni: 1) - Room Temperature X-Ray Mixed-Metal Structure of D-Xylose Isomerase in Complex with Ni(2+) and Mg(2+) Co-Factors
Other atoms:
Mg (1);
-
3kco (Ni: 3) - Room Temperature Neutron Structure of D-Xylose Isomerase in Complex with Two NI2+ Cations and D12-D-Glucose in the Linear Form (Refined Jointly with X-Ray Structure 3KBN)
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3kkc (Ni: 4) - The Crystal Structure of Tetr Transcriptional Regulator From Streptococcus Agalactiae 2603V
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3kv4 (Ni: 1) - Structure of PHF8 in Complex with Histone H3
Other atoms:
Fe (1);
Zn (2);
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3kvb (Ni: 2) - Structure of KIAA1718 Jumonji Domain in Complex with N- Oxalylglycine
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