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Nickel in PDB 3mgq: Binding of Nickel Ions to the Nucleosome Core Particle

Protein crystallography data

The structure of Binding of Nickel Ions to the Nucleosome Core Particle, PDB code: 3mgq was solved by K.Mohideen, R.Muhammad, C.A.Davey, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 51.00 / 2.65
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 106.129, 109.643, 183.109, 90.00, 90.00, 90.00
R / Rfree (%) 23.2 / 27.6

Other elements in 3mgq:

The structure of Binding of Nickel Ions to the Nucleosome Core Particle also contains other interesting chemical elements:

Chlorine (Cl) 4 atoms

Nickel Binding Sites:

The binding sites of Nickel atom in the Binding of Nickel Ions to the Nucleosome Core Particle (pdb code 3mgq). This binding sites where shown within 5.0 Angstroms radius around Nickel atom.
In total 47 binding sites of Nickel where determined in the Binding of Nickel Ions to the Nucleosome Core Particle, PDB code: 3mgq:
Jump to Nickel binding site number: 1; 2; 3; 4; 5; 6; 7; 8; 9; 10; 11; 12; 13; 14; 15; 16; 17; 18; 19; 20; 21; 22; 23; 24; 25; 26; 27; 28; 29; 30; 31; 32; 33; 34; 35; 36; 37; 38; 39; 40; 41; 42; 43; 44; 45; 46; 47;

Nickel binding site 1 out of 47 in 3mgq

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Nickel binding site 1 out of 47 in the Binding of Nickel Ions to the Nucleosome Core Particle


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Stereo pair view

A full contact list of Nickel with other atoms in the Ni binding site number 1 of Binding of Nickel Ions to the Nucleosome Core Particle within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ni136

b:0.1
occ:0.35
OD2 A:ASP77 2.5 76.2 1.0
CG A:ASP77 3.4 73.0 1.0
OD1 A:ASP77 3.5 74.4 1.0
O A:GLU73 4.2 61.0 1.0
CG A:GLU73 4.7 64.7 1.0
CB A:ASP77 4.8 70.2 1.0

Nickel binding site 2 out of 47 in 3mgq

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Nickel binding site 2 out of 47 in the Binding of Nickel Ions to the Nucleosome Core Particle


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Stereo pair view

A full contact list of Nickel with other atoms in the Ni binding site number 2 of Binding of Nickel Ions to the Nucleosome Core Particle within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Ni120

b:0.8
occ:0.33
OD1 C:ASP90 2.4 52.4 1.0
CG C:ASP90 3.3 48.6 1.0
OD2 C:ASP90 3.5 51.2 1.0
OE1 C:GLU92 4.3 49.9 1.0
OE2 C:GLU61 4.7 62.9 1.0
CB C:ASP90 4.7 46.1 1.0
CB C:GLU92 4.9 46.6 1.0
CD C:GLU92 5.0 49.0 1.0

Nickel binding site 3 out of 47 in 3mgq

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Nickel binding site 3 out of 47 in the Binding of Nickel Ions to the Nucleosome Core Particle


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Stereo pair view

A full contact list of Nickel with other atoms in the Ni binding site number 3 of Binding of Nickel Ions to the Nucleosome Core Particle within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Ni123

b:0.2
occ:0.75
NE2 D:HIS106 2.5 63.4 1.0
OE2 D:GLU102 2.6 66.0 1.0
CE1 D:HIS106 2.7 63.6 1.0
CD D:GLU102 3.7 64.4 1.0
CD2 D:HIS106 3.7 61.5 1.0
ND1 D:HIS106 3.9 61.5 1.0
OE1 D:GLU102 4.1 65.5 1.0
CG D:HIS106 4.4 59.5 1.0
CG D:GLU102 4.9 59.8 1.0

Nickel binding site 4 out of 47 in 3mgq

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Nickel binding site 4 out of 47 in the Binding of Nickel Ions to the Nucleosome Core Particle


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Stereo pair view

A full contact list of Nickel with other atoms in the Ni binding site number 4 of Binding of Nickel Ions to the Nucleosome Core Particle within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Ni124

b:83.4
occ:0.41
NE2 D:HIS79 2.1 76.6 1.0
CD2 D:HIS79 3.0 75.6 1.0
CE1 D:HIS79 3.1 75.8 1.0
ND1 D:HIS79 4.1 76.0 1.0
CG D:HIS79 4.2 73.4 1.0
OE2 H:GLU68 4.2 58.2 1.0
NZ G:LYS36 4.9 77.0 1.0

Nickel binding site 5 out of 47 in 3mgq

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Nickel binding site 5 out of 47 in the Binding of Nickel Ions to the Nucleosome Core Particle


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Stereo pair view

A full contact list of Nickel with other atoms in the Ni binding site number 5 of Binding of Nickel Ions to the Nucleosome Core Particle within 5.0Å range:
probe atom residue distance (Å) B Occ
E:Ni136

b:88.6
occ:1.00
OD1 E:ASP77 2.0 46.3 1.0
CG E:ASP77 3.1 47.6 1.0
OD2 E:ASP77 3.4 48.3 1.0
O F:LEU22 4.1 55.2 1.0
OE1 E:GLN76 4.3 50.6 1.0
CB E:ASP77 4.5 46.3 1.0
O E:GLU73 4.6 43.6 1.0
N E:ASP77 4.6 46.7 1.0
CG E:GLU73 4.7 40.7 1.0
CA E:ASP77 4.8 47.3 1.0

Nickel binding site 6 out of 47 in 3mgq

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Nickel binding site 6 out of 47 in the Binding of Nickel Ions to the Nucleosome Core Particle


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Stereo pair view

A full contact list of Nickel with other atoms in the Ni binding site number 6 of Binding of Nickel Ions to the Nucleosome Core Particle within 5.0Å range:
probe atom residue distance (Å) B Occ
F:Ni103

b:0.7
occ:0.09
OD2 F:ASP24 3.0 59.4 1.0
CG F:ASP24 4.0 56.2 1.0
CB F:ASP24 4.2 52.9 1.0
O F:ASP24 4.8 52.2 1.0
CB F:GLN27 4.8 50.5 1.0

Nickel binding site 7 out of 47 in 3mgq

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Nickel binding site 7 out of 47 in the Binding of Nickel Ions to the Nucleosome Core Particle


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Stereo pair view

A full contact list of Nickel with other atoms in the Ni binding site number 7 of Binding of Nickel Ions to the Nucleosome Core Particle within 5.0Å range:
probe atom residue distance (Å) B Occ
G:Ni120

b:82.5
occ:0.18
OD1 G:ASP90 2.2 60.9 1.0
OD2 G:ASP90 2.7 59.4 1.0
CG G:ASP90 2.8 57.2 1.0
CB G:ASP90 4.2 55.6 1.0
CB G:GLU92 4.4 57.3 1.0
OE2 G:GLU61 4.6 65.9 1.0
N G:GLU92 4.7 57.5 1.0
OE1 G:GLU92 4.8 67.0 1.0
CG G:GLU92 4.8 60.0 1.0
CA G:ASP90 4.9 55.5 1.0
CD1 G:LEU65 5.0 58.4 1.0

Nickel binding site 8 out of 47 in 3mgq

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Nickel binding site 8 out of 47 in the Binding of Nickel Ions to the Nucleosome Core Particle


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Stereo pair view

A full contact list of Nickel with other atoms in the Ni binding site number 8 of Binding of Nickel Ions to the Nucleosome Core Particle within 5.0Å range:
probe atom residue distance (Å) B Occ
H:Ni123

b:72.6
occ:0.34
NE2 H:HIS79 2.5 65.5 1.0
CD2 H:HIS79 3.1 64.2 1.0
CE1 H:HIS79 3.6 64.6 1.0
CG H:HIS79 4.3 63.0 1.0
ND1 H:HIS79 4.5 64.8 1.0
OH F:TYR88 4.8 50.0 1.0

Nickel binding site 9 out of 47 in 3mgq

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Nickel binding site 9 out of 47 in the Binding of Nickel Ions to the Nucleosome Core Particle


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A full contact list of Nickel with other atoms in the Ni binding site number 9 of Binding of Nickel Ions to the Nucleosome Core Particle within 5.0Å range:
probe atom residue distance (Å) B Occ
H:Ni124

b:0.5
occ:0.51
NE2 H:HIS106 2.0 74.7 1.0
CE1 H:HIS106 2.4 73.3 1.0
OE2 H:GLU102 3.0 71.8 1.0
CD2 H:HIS106 3.2 71.6 1.0
NZ H:LYS105 3.5 71.0 1.0
ND1 H:HIS106 3.6 73.0 1.0
CG H:HIS106 4.1 69.4 1.0
CD H:GLU102 4.2 70.4 1.0
CE H:LYS105 4.7 70.8 1.0
CG H:GLU102 4.8 65.0 1.0

Nickel binding site 10 out of 47 in 3mgq

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Nickel binding site 10 out of 47 in the Binding of Nickel Ions to the Nucleosome Core Particle


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Stereo pair view

A full contact list of Nickel with other atoms in the Ni binding site number 10 of Binding of Nickel Ions to the Nucleosome Core Particle within 5.0Å range:
probe atom residue distance (Å) B Occ
H:Ni125

b:0.1
occ:0.38
ND1 H:HIS46 2.8 78.5 1.0
CE1 H:HIS46 3.3 78.3 1.0
CG H:HIS46 3.6 78.1 1.0
OD1 H:ASP48 3.8 77.3 1.0
O H:VAL45 4.0 77.3 1.0
CB H:HIS46 4.1 77.5 1.0
CA H:HIS46 4.2 77.1 1.0
NE2 H:HIS46 4.2 78.0 1.0
CD2 H:HIS46 4.3 78.3 1.0
OD2 H:ASP48 4.4 78.9 1.0
CG H:ASP48 4.5 77.4 1.0
C H:VAL45 5.0 76.9 1.0

Nickel binding site 11 out of 47 in 3mgq

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Nickel binding site 11 out of 47 in the Binding of Nickel Ions to the Nucleosome Core Particle


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Stereo pair view

A full contact list of Nickel with other atoms in the Ni binding site number 11 of Binding of Nickel Ions to the Nucleosome Core Particle within 5.0Å range:
probe atom residue distance (Å) B Occ
I:Ni74

b:0.8
occ:0.73
N7 I:DG61 2.3 96.3 1.0
C8 I:DG61 3.3 96.3 1.0
C5 I:DG61 3.3 96.5 1.0
O6 I:DG61 3.5 96.3 1.0
C6 I:DG61 3.8 96.6 1.0
C8 I:DA60 4.0 90.7 1.0
N7 I:DA60 4.0 90.7 1.0
N9 I:DG61 4.5 96.7 1.0
O6 I:DG62 4.5 0.1 1.0
C4 I:DG61 4.5 96.6 1.0
N9 I:DA60 4.7 91.0 1.0
C5 I:DA60 4.7 90.5 1.0

Nickel binding site 12 out of 47 in 3mgq

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Nickel binding site 12 out of 47 in the Binding of Nickel Ions to the Nucleosome Core Particle


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Stereo pair view

A full contact list of Nickel with other atoms in the Ni binding site number 12 of Binding of Nickel Ions to the Nucleosome Core Particle within 5.0Å range:
probe atom residue distance (Å) B Occ
I:Ni75

b:75.6
occ:0.47
N7 I:DG-3 2.3 85.3 1.0
C5 I:DG-3 3.3 85.5 1.0
C8 I:DG-3 3.3 85.6 1.0
O6 I:DG-3 3.4 85.4 1.0
C6 I:DG-3 3.7 85.6 1.0
O6 I:DG-2 4.4 91.0 1.0
C4 I:DG-3 4.5 85.4 1.0
N9 I:DG-3 4.5 85.3 1.0
C6 I:DT-4 4.7 81.6 1.0
C2' I:DT-4 4.7 78.5 1.0
C5 I:DT-4 4.8 82.0 1.0
C7 I:DT-4 4.9 81.6 1.0

Nickel binding site 13 out of 47 in 3mgq

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Nickel binding site 13 out of 47 in the Binding of Nickel Ions to the Nucleosome Core Particle


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Stereo pair view

A full contact list of Nickel with other atoms in the Ni binding site number 13 of Binding of Nickel Ions to the Nucleosome Core Particle within 5.0Å range:
probe atom residue distance (Å) B Occ
I:Ni76

b:0.1
occ:0.70
N7 I:DG48 1.9 0.7 1.0
O6 I:DG48 2.6 0.2 1.0
C5 I:DG48 2.7 0.5 1.0
C6 I:DG48 3.0 0.4 1.0
C8 I:DG48 3.1 0.6 1.0
C2' I:DT47 3.8 0.5 1.0
C4 I:DG48 4.0 0.4 1.0
N9 I:DG48 4.2 0.1 1.0
N1 I:DG48 4.4 0.4 1.0
OP2 I:DG48 4.5 0.1 1.0
O6 I:DG49 4.5 0.4 1.0
C1' I:DT47 4.8 0.2 1.0
C3' I:DT47 4.9 0.1 1.0
O3' I:DT47 4.9 0.3 1.0
C6 I:DT47 5.0 0.3 1.0

Nickel binding site 14 out of 47 in 3mgq

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Nickel binding site 14 out of 47 in the Binding of Nickel Ions to the Nucleosome Core Particle


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A full contact list of Nickel with other atoms in the Ni binding site number 14 of Binding of Nickel Ions to the Nucleosome Core Particle within 5.0Å range:
probe atom residue distance (Å) B Occ
I:Ni77

b:0.6
occ:0.54
N7 I:DG27 2.2 82.7 1.0
O6 I:DG27 3.0 82.7 1.0
C5 I:DG27 3.0 82.3 1.0
C8 I:DG27 3.3 82.4 1.0
C6 I:DG27 3.3 82.3 1.0
C8 I:DA26 3.5 93.6 1.0
N7 I:DA26 3.6 94.2 1.0
C4 I:DG27 4.2 82.3 1.0
N9 I:DG27 4.4 82.1 1.0
N9 I:DA26 4.5 93.2 1.0
C5 I:DA26 4.5 93.8 1.0
O6 J:DG-28 4.7 0.5 1.0
N1 I:DG27 4.7 82.4 1.0
C2' I:DA26 4.9 90.6 1.0

Nickel binding site 15 out of 47 in 3mgq

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Nickel binding site 15 out of 47 in the Binding of Nickel Ions to the Nucleosome Core Particle


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Stereo pair view

A full contact list of Nickel with other atoms in the Ni binding site number 15 of Binding of Nickel Ions to the Nucleosome Core Particle within 5.0Å range:
probe atom residue distance (Å) B Occ
I:Ni78

b:0.0
occ:0.69
N7 I:DG-56 2.0 0.4 1.0
C5 I:DG-56 2.9 0.3 1.0
O6 I:DG-56 3.0 0.3 1.0
C8 I:DG-56 3.1 0.5 1.0
C6 I:DG-56 3.3 0.2 1.0
N7 I:DA-57 3.7 0.2 1.0
C8 I:DA-57 3.8 0.0 1.0
C4 I:DG-56 4.1 0.3 1.0
N9 I:DG-56 4.2 0.3 1.0
C5 I:DA-57 4.5 1.0 1.0
N9 I:DA-57 4.5 0.1 1.0
N1 I:DG-56 4.7 0.3 1.0
N6 I:DA-55 4.7 0.8 1.0
C4 I:DA-57 4.9 0.1 1.0

Nickel binding site 16 out of 47 in 3mgq

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Nickel binding site 16 out of 47 in the Binding of Nickel Ions to the Nucleosome Core Particle


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Stereo pair view

A full contact list of Nickel with other atoms in the Ni binding site number 16 of Binding of Nickel Ions to the Nucleosome Core Particle within 5.0Å range:
probe atom residue distance (Å) B Occ
I:Ni79

b:0.1
occ:0.31
C5' J:DC-64 3.8 91.9 1.0
O4' J:DC-64 3.9 91.0 1.0
C4' J:DC-64 4.1 92.0 1.0
O2 J:DC-65 4.3 87.5 1.0
N3 I:DA66 4.6 95.9 1.0
C1' J:DC-65 4.7 87.3 1.0
C5' I:DT67 4.7 95.5 1.0
C4' I:DT67 4.7 94.1 1.0
O4' I:DT67 4.8 92.6 1.0
N2 I:DG65 4.9 0.4 1.0
O3' J:DC-65 4.9 90.0 1.0
C2 I:DA66 4.9 95.7 1.0

Nickel binding site 17 out of 47 in 3mgq

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Nickel binding site 17 out of 47 in the Binding of Nickel Ions to the Nucleosome Core Particle


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Stereo pair view

A full contact list of Nickel with other atoms in the Ni binding site number 17 of Binding of Nickel Ions to the Nucleosome Core Particle within 5.0Å range:
probe atom residue distance (Å) B Occ
I:Ni80

b:98.4
occ:0.60
N7 I:DG-35 2.5 96.2 1.0
O6 I:DG-34 2.7 94.4 1.0
NI I:NI86 3.3 71.5 0.3
C8 I:DG-35 3.4 96.5 1.0
C6 I:DG-34 3.5 94.5 1.0
C5 I:DG-35 3.6 96.1 1.0
O6 I:DG-35 3.8 96.6 1.0
C6 I:DG-35 4.0 96.2 1.0
N7 I:DG-34 4.1 94.1 1.0
C5 I:DG-34 4.1 94.5 1.0
OP2 I:DG-35 4.2 98.6 1.0
N4 J:DC34 4.4 0.3 1.0
N1 I:DG-34 4.6 94.1 1.0
N9 I:DG-35 4.6 96.3 1.0
C4 I:DG-35 4.7 96.1 1.0
O4 J:DT33 5.0 0.9 1.0

Nickel binding site 18 out of 47 in 3mgq

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Nickel binding site 18 out of 47 in the Binding of Nickel Ions to the Nucleosome Core Particle


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Stereo pair view

A full contact list of Nickel with other atoms in the Ni binding site number 18 of Binding of Nickel Ions to the Nucleosome Core Particle within 5.0Å range:
probe atom residue distance (Å) B Occ
I:Ni81

b:84.8
occ:0.44
N7 I:DA29 2.7 98.7 1.0
C8 I:DA29 3.4 98.7 1.0
C5 I:DA29 3.7 98.5 1.0
N6 I:DA29 4.1 98.5 1.0
O6 I:DG30 4.2 0.1 1.0
C6 I:DA29 4.3 98.6 1.0
C6 I:DC28 4.6 83.9 1.0
N9 I:DA29 4.6 98.5 1.0
C5 I:DC28 4.7 84.7 1.0
C4 I:DA29 4.8 98.7 1.0

Nickel binding site 19 out of 47 in 3mgq

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Nickel binding site 19 out of 47 in the Binding of Nickel Ions to the Nucleosome Core Particle


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Stereo pair view

A full contact list of Nickel with other atoms in the Ni binding site number 19 of Binding of Nickel Ions to the Nucleosome Core Particle within 5.0Å range:
probe atom residue distance (Å) B Occ
I:Ni82

b:67.2
occ:0.19
O6 I:DG25 2.5 0.9 1.0
N7 I:DG24 2.8 0.5 1.0
NI I:NI89 3.0 0.6 0.4
C6 I:DG25 3.4 0.8 1.0
O6 I:DG24 3.5 0.7 1.0
C5 I:DG24 3.7 0.8 1.0
C8 I:DG24 3.9 0.7 1.0
N4 J:DC-25 3.9 87.2 1.0
C6 I:DG24 3.9 0.6 1.0
N1 I:DG25 4.2 0.5 1.0
C5 I:DG25 4.4 0.7 1.0
N7 I:DG25 4.7 0.8 1.0
C5 I:DT23 4.8 0.3 1.0
C6 I:DT23 4.8 0.4 1.0
C7 I:DT23 4.8 0.2 1.0
C4 I:DG24 4.9 1.0 1.0
N9 I:DG24 5.0 0.9 1.0

Nickel binding site 20 out of 47 in 3mgq

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Nickel binding site 20 out of 47 in the Binding of Nickel Ions to the Nucleosome Core Particle


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A full contact list of Nickel with other atoms in the Ni binding site number 20 of Binding of Nickel Ions to the Nucleosome Core Particle within 5.0Å range:
probe atom residue distance (Å) B Occ
I:Ni83

b:77.9
occ:0.19
N7 I:DG71 2.3 87.9 1.0
C8 I:DG71 3.2 87.8 1.0
C5 I:DG71 3.3 87.8 1.0
O6 I:DG71 3.6 87.6 1.0
C6 I:DG71 3.8 87.9 1.0
N9 I:DG71 4.4 87.7 1.0
N6 I:DA72 4.4 96.4 1.0
C4 I:DG71 4.4 87.5 1.0
C6 I:DT70 5.0 87.7 1.0

Nickel binding site 21 out of 47 in 3mgq

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Nickel binding site 21 out of 47 in the Binding of Nickel Ions to the Nucleosome Core Particle


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Stereo pair view

A full contact list of Nickel with other atoms in the Ni binding site number 21 of Binding of Nickel Ions to the Nucleosome Core Particle within 5.0Å range:
probe atom residue distance (Å) B Occ
I:Ni84

b:0.5
occ:0.38
N7 I:DG64 3.1 0.9 1.0
O6 I:DG65 3.3 0.2 1.0
C8 I:DG64 3.5 0.2 1.0
N7 I:DG65 3.6 0.3 1.0
C6 I:DG65 4.1 0.1 1.0
C5 I:DG64 4.2 0.9 1.0
C5 I:DG65 4.2 0.3 1.0
OP2 I:DG64 4.6 0.5 1.0
N9 I:DG64 4.6 0.5 1.0
C8 I:DG65 4.7 0.4 1.0
O6 I:DG64 4.9 0.8 1.0
C6 I:DG64 4.9 0.8 1.0
C4 I:DG64 5.0 0.1 1.0

Nickel binding site 22 out of 47 in 3mgq

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Nickel binding site 22 out of 47 in the Binding of Nickel Ions to the Nucleosome Core Particle


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Stereo pair view

A full contact list of Nickel with other atoms in the Ni binding site number 22 of Binding of Nickel Ions to the Nucleosome Core Particle within 5.0Å range:
probe atom residue distance (Å) B Occ
I:Ni85

b:0.2
occ:0.22
N7 I:DG-6 3.0 90.0 1.0
O6 I:DG-6 3.6 89.8 1.0
NI J:NI82 3.7 0.8 0.5
C5 I:DG-6 3.9 89.5 1.0
C8 I:DG-6 4.0 89.6 1.0
O6 J:DG5 4.0 0.1 1.0
C6 I:DG-6 4.1 89.5 1.0
N7 I:DA-7 4.4 93.1 1.0
C8 I:DA-7 4.5 93.0 1.0
C6 J:DG5 4.9 1.0 1.0

Nickel binding site 23 out of 47 in 3mgq

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Nickel binding site 23 out of 47 in the Binding of Nickel Ions to the Nucleosome Core Particle


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Stereo pair view

A full contact list of Nickel with other atoms in the Ni binding site number 23 of Binding of Nickel Ions to the Nucleosome Core Particle within 5.0Å range:
probe atom residue distance (Å) B Occ
I:Ni86

b:71.5
occ:0.27
N7 I:DG-34 2.2 94.1 1.0
C8 I:DG-34 3.0 94.3 1.0
NI I:NI80 3.3 98.4 0.6
C5 I:DG-34 3.3 94.5 1.0
O6 I:DG-34 3.8 94.4 1.0
C8 I:DG-35 3.8 96.5 1.0
C6 I:DG-34 3.9 94.5 1.0
N7 I:DG-35 4.0 96.2 1.0
N9 I:DG-34 4.3 94.1 1.0
C4 I:DG-34 4.4 94.2 1.0
C2' I:DG-35 4.7 94.9 1.0
N9 I:DG-35 4.7 96.3 1.0
C5 I:DG-35 5.0 96.1 1.0
OP2 I:DG-35 5.0 98.6 1.0

Nickel binding site 24 out of 47 in 3mgq

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Nickel binding site 24 out of 47 in the Binding of Nickel Ions to the Nucleosome Core Particle


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Stereo pair view

A full contact list of Nickel with other atoms in the Ni binding site number 24 of Binding of Nickel Ions to the Nucleosome Core Particle within 5.0Å range:
probe atom residue distance (Å) B Occ
I:Ni87

b:0.1
occ:0.37
NI I:NI91 2.7 0.1 0.2
N4 I:DC59 3.1 91.2 1.0
N7 I:DG58 3.3 92.1 1.0
O6 J:DG-59 3.3 0.6 1.0
O6 I:DG58 3.3 92.4 1.0
C5 I:DG58 3.9 92.1 1.0
C6 I:DG58 3.9 92.3 1.0
C4 I:DC59 4.3 91.0 1.0
C8 I:DG58 4.4 92.1 1.0
C6 J:DG-59 4.5 0.7 1.0
C2' I:DT57 4.6 0.4 1.0
C7 J:DT-60 4.8 0.1 1.0
C5 I:DC59 5.0 90.4 1.0

Nickel binding site 25 out of 47 in 3mgq

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Nickel binding site 25 out of 47 in the Binding of Nickel Ions to the Nucleosome Core Particle


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Stereo pair view

A full contact list of Nickel with other atoms in the Ni binding site number 25 of Binding of Nickel Ions to the Nucleosome Core Particle within 5.0Å range:
probe atom residue distance (Å) B Occ
I:Ni88

b:81.0
occ:0.27
N7 I:DG52 3.6 0.1 1.0
N7 I:DA51 4.1 0.1 1.0
C8 I:DA51 4.1 0.9 1.0
C8 I:DG52 4.4 0.1 1.0
C7 I:DT50 4.6 0.3 1.0
O6 I:DG52 4.7 0.0 1.0
C5 I:DG52 4.7 0.1 1.0
O4 I:DT53 5.0 0.8 1.0

Nickel binding site 26 out of 47 in 3mgq

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Nickel binding site 26 out of 47 in the Binding of Nickel Ions to the Nucleosome Core Particle


Mono view


Stereo pair view

A full contact list of Nickel with other atoms in the Ni binding site number 26 of Binding of Nickel Ions to the Nucleosome Core Particle within 5.0Å range:
probe atom residue distance (Å) B Occ
I:Ni89

b:0.6
occ:0.43
N7 I:DG25 2.6 0.8 1.0
O6 I:DG25 2.8 0.9 1.0
NI I:NI82 3.0 67.2 0.2
C8 I:DG24 3.2 0.7 1.0
N7 I:DG24 3.2 0.5 1.0
C5 I:DG25 3.2 0.7 1.0
C6 I:DG25 3.3 0.8 1.0
C8 I:DG25 3.8 0.7 1.0
N9 I:DG24 4.2 0.9 1.0
C5 I:DG24 4.2 0.8 1.0
C4 I:DG25 4.5 0.5 1.0
OP2 I:DG24 4.7 0.2 1.0
N1 I:DG25 4.7 0.5 1.0
C4 I:DG24 4.8 1.0 1.0
N9 I:DG25 4.8 0.6 1.0
C2' I:DG24 4.8 0.5 1.0

Nickel binding site 27 out of 47 in 3mgq

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Nickel binding site 27 out of 47 in the Binding of Nickel Ions to the Nucleosome Core Particle


Mono view


Stereo pair view

A full contact list of Nickel with other atoms in the Ni binding site number 27 of Binding of Nickel Ions to the Nucleosome Core Particle within 5.0Å range:
probe atom residue distance (Å) B Occ
I:Ni90

b:0.3
occ:0.28
O2 I:DT1 3.8 0.6 1.0
O2 J:DT0 4.0 92.6 1.0
O4' I:DC2 4.2 0.2 1.0
C4' I:DC2 4.5 0.4 1.0
C5' I:DC2 4.6 0.2 1.0
O4' J:DT1 4.8 99.8 1.0
C2 I:DT1 4.9 0.4 1.0
C5' J:DT1 5.0 97.3 1.0

Nickel binding site 28 out of 47 in 3mgq

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Nickel binding site 28 out of 47 in the Binding of Nickel Ions to the Nucleosome Core Particle


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Stereo pair view

A full contact list of Nickel with other atoms in the Ni binding site number 28 of Binding of Nickel Ions to the Nucleosome Core Particle within 5.0Å range:
probe atom residue distance (Å) B Occ
I:Ni91

b:0.1
occ:0.22
NI I:NI87 2.7 0.1 0.4
C2' I:DT57 3.6 0.4 1.0
O6 I:DG58 4.2 92.4 1.0
C6 I:DT57 4.4 0.2 1.0
N7 I:DG58 4.5 92.1 1.0
C3' I:DT57 4.7 0.7 1.0
C1' I:DT57 4.7 0.6 1.0
N1 I:DT57 4.9 0.9 1.0
OP2 I:DT57 5.0 0.2 1.0

Nickel binding site 29 out of 47 in 3mgq

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Nickel binding site 29 out of 47 in the Binding of Nickel Ions to the Nucleosome Core Particle


Mono view


Stereo pair view

A full contact list of Nickel with other atoms in the Ni binding site number 29 of Binding of Nickel Ions to the Nucleosome Core Particle within 5.0Å range:
probe atom residue distance (Å) B Occ
J:Ni74

b:97.2
occ:0.71
N7 J:DG27 2.0 95.0 1.0
O6 J:DG27 2.6 93.8 1.0
C5 J:DG27 2.7 94.5 1.0
C6 J:DG27 3.0 93.9 1.0
C8 J:DG27 3.1 94.1 1.0
O6 I:DG-28 3.6 0.0 1.0
C4 J:DG27 4.0 94.1 1.0
N9 J:DG27 4.2 94.0 1.0
N1 J:DG27 4.4 93.8 1.0
C8 J:DA26 4.5 99.4 1.0
C6 I:DG-28 4.7 0.2 1.0
N4 J:DC28 4.7 86.2 1.0
N7 J:DA26 4.8 99.5 1.0

Nickel binding site 30 out of 47 in 3mgq

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Nickel binding site 30 out of 47 in the Binding of Nickel Ions to the Nucleosome Core Particle


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Stereo pair view

A full contact list of Nickel with other atoms in the Ni binding site number 30 of Binding of Nickel Ions to the Nucleosome Core Particle within 5.0Å range:
probe atom residue distance (Å) B Occ
J:Ni75

b:0.0
occ:0.80
N7 J:DG48 2.4 0.3 1.0
C8 J:DG48 3.3 0.2 1.0
C5 J:DG48 3.4 0.5 1.0
O6 J:DG48 3.6 0.4 1.0
C6 J:DG48 3.9 0.2 1.0
OP2 J:DG48 4.5 99.2 1.0
N9 J:DG48 4.5 99.9 1.0
C4 J:DG48 4.5 0.5 1.0
C2' J:DT47 4.6 0.3 1.0
O6 J:DG49 4.6 97.5 1.0

Nickel binding site 31 out of 47 in 3mgq

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Nickel binding site 31 out of 47 in the Binding of Nickel Ions to the Nucleosome Core Particle


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Stereo pair view

A full contact list of Nickel with other atoms in the Ni binding site number 31 of Binding of Nickel Ions to the Nucleosome Core Particle within 5.0Å range:
probe atom residue distance (Å) B Occ
J:Ni76

b:83.7
occ:0.66
N7 J:DG-3 2.3 73.3 1.0
C8 J:DG-3 3.2 72.7 1.0
C5 J:DG-3 3.5 72.9 1.0
O6 J:DG-3 3.8 73.2 1.0
C2' J:DT-4 4.0 79.2 1.0
C6 J:DG-3 4.0 73.1 1.0
OP2 J:DG-3 4.3 69.1 1.0
N9 J:DG-3 4.4 72.1 1.0
O6 J:DG-2 4.5 70.2 1.0
C4 J:DG-3 4.6 72.3 1.0
O3' J:DT-4 4.6 74.5 1.0
C3' J:DT-4 4.7 77.7 1.0
C1' J:DT-4 4.9 82.6 1.0

Nickel binding site 32 out of 47 in 3mgq

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Nickel binding site 32 out of 47 in the Binding of Nickel Ions to the Nucleosome Core Particle


Mono view


Stereo pair view

A full contact list of Nickel with other atoms in the Ni binding site number 32 of Binding of Nickel Ions to the Nucleosome Core Particle within 5.0Å range:
probe atom residue distance (Å) B Occ
J:Ni77

b:88.7
occ:0.58
N7 J:DG61 2.2 0.1 1.0
C8 J:DG61 3.2 0.3 1.0
C5 J:DG61 3.3 0.5 1.0
O6 J:DG61 3.5 0.3 1.0
C6 J:DG61 3.7 0.3 1.0
C8 J:DA60 3.9 97.3 1.0
N7 J:DA60 3.9 97.0 1.0
O6 J:DG62 4.0 0.3 1.0
N9 J:DG61 4.4 0.5 1.0
C4 J:DG61 4.5 0.5 1.0
N9 J:DA60 4.6 97.5 1.0
C5 J:DA60 4.8 97.3 1.0
C6 J:DG62 4.9 0.4 1.0
C2' J:DA60 4.9 97.1 1.0
N7 J:DG62 5.0 0.4 1.0

Nickel binding site 33 out of 47 in 3mgq

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Nickel binding site 33 out of 47 in the Binding of Nickel Ions to the Nucleosome Core Particle


Mono view


Stereo pair view

A full contact list of Nickel with other atoms in the Ni binding site number 33 of Binding of Nickel Ions to the Nucleosome Core Particle within 5.0Å range:
probe atom residue distance (Å) B Occ
J:Ni78

b:66.7
occ:0.37
N7 J:DG8 2.5 79.7 1.0
C8 J:DG8 3.4 79.5 1.0
C5 J:DG8 3.5 79.8 1.0
O6 J:DG8 3.6 79.4 1.0
C6 J:DG8 3.9 79.4 1.0
C2' J:DT7 4.4 87.8 1.0
N9 J:DG8 4.6 79.0 1.0
C4 J:DG8 4.6 79.3 1.0
N6 J:DA9 4.7 78.7 1.0
C6 J:DT7 4.7 91.7 1.0

Nickel binding site 34 out of 47 in 3mgq

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Nickel binding site 34 out of 47 in the Binding of Nickel Ions to the Nucleosome Core Particle


Mono view


Stereo pair view

A full contact list of Nickel with other atoms in the Ni binding site number 34 of Binding of Nickel Ions to the Nucleosome Core Particle within 5.0Å range:
probe atom residue distance (Å) B Occ
J:Ni79

b:89.1
occ:0.48
N7 J:DG-6 2.4 94.7 1.0
C8 J:DG-6 3.3 94.5 1.0
C5 J:DG-6 3.5 94.5 1.0
O6 J:DG-6 3.8 94.1 1.0
C6 J:DG-6 4.1 94.0 1.0
N7 J:DA-7 4.3 99.5 1.0
C8 J:DA-7 4.3 99.5 1.0
N9 J:DG-6 4.5 94.2 1.0
C4 J:DG-6 4.7 94.5 1.0
O6 I:DG5 4.7 76.4 1.0

Nickel binding site 35 out of 47 in 3mgq

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Nickel binding site 35 out of 47 in the Binding of Nickel Ions to the Nucleosome Core Particle


Mono view


Stereo pair view

A full contact list of Nickel with other atoms in the Ni binding site number 35 of Binding of Nickel Ions to the Nucleosome Core Particle within 5.0Å range:
probe atom residue distance (Å) B Occ
J:Ni80

b:0.9
occ:0.54
N7 J:DA29 2.2 99.1 1.0
C8 J:DA29 3.2 98.9 1.0
C5 J:DA29 3.3 99.4 1.0
N6 J:DA29 3.5 98.8 1.0
O6 J:DG30 3.6 0.7 1.0
C6 J:DA29 3.8 99.0 1.0
C6 J:DC28 4.2 86.3 1.0
N9 J:DA29 4.4 99.1 1.0
C5 J:DC28 4.4 86.0 1.0
C4 J:DA29 4.5 99.5 1.0
C6 J:DG30 4.6 0.8 1.0
C2' J:DC28 4.8 86.4 1.0
N7 J:DG30 4.9 0.6 1.0
N1 J:DC28 4.9 86.3 1.0

Nickel binding site 36 out of 47 in 3mgq

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Nickel binding site 36 out of 47 in the Binding of Nickel Ions to the Nucleosome Core Particle


Mono view


Stereo pair view

A full contact list of Nickel with other atoms in the Ni binding site number 36 of Binding of Nickel Ions to the Nucleosome Core Particle within 5.0Å range:
probe atom residue distance (Å) B Occ
J:Ni81

b:0.8
occ:0.66
N7 J:DG-56 2.3 0.1 1.0
C8 J:DG-56 3.1 0.9 1.0
C5 J:DG-56 3.5 1.0 1.0
C8 J:DA-57 3.8 0.4 1.0
N7 J:DA-57 3.9 0.5 1.0
O6 J:DG-56 3.9 0.8 1.0
C6 J:DG-56 4.1 0.9 1.0
N9 J:DG-56 4.4 0.9 1.0
C4 J:DG-56 4.5 1.0 1.0
N9 J:DA-57 4.6 0.6 1.0
C5 J:DA-57 4.7 0.2 1.0
C2' J:DA-57 4.9 0.4 1.0

Nickel binding site 37 out of 47 in 3mgq

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Nickel binding site 37 out of 47 in the Binding of Nickel Ions to the Nucleosome Core Particle


Mono view


Stereo pair view

A full contact list of Nickel with other atoms in the Ni binding site number 37 of Binding of Nickel Ions to the Nucleosome Core Particle within 5.0Å range:
probe atom residue distance (Å) B Occ
J:Ni82

b:0.8
occ:0.45
N7 J:DG5 2.5 0.3 1.0
C8 J:DG5 3.3 0.1 1.0
C5 J:DG5 3.6 0.4 1.0
NI I:NI85 3.7 0.2 0.2
O6 J:DG5 3.8 0.1 1.0
C6 J:DG5 4.1 1.0 1.0
C8 J:DA4 4.2 0.6 1.0
O6 I:DG-6 4.4 89.8 1.0
N7 J:DA4 4.4 0.5 1.0
N9 J:DG5 4.6 0.2 1.0
N9 J:DA4 4.6 0.4 1.0
C2' J:DA4 4.6 0.6 1.0
C4 J:DG5 4.7 0.7 1.0

Nickel binding site 38 out of 47 in 3mgq

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Nickel binding site 38 out of 47 in the Binding of Nickel Ions to the Nucleosome Core Particle


Mono view


Stereo pair view

A full contact list of Nickel with other atoms in the Ni binding site number 38 of Binding of Nickel Ions to the Nucleosome Core Particle within 5.0Å range:
probe atom residue distance (Å) B Occ
J:Ni83

b:84.0
occ:0.26
N7 J:DG71 2.2 94.4 1.0
C8 J:DG71 3.1 94.5 1.0
C5 J:DG71 3.2 94.2 1.0
O6 J:DG71 3.4 94.3 1.0
C6 J:DG71 3.7 94.2 1.0
N6 J:DA72 4.3 97.7 1.0
C6 J:DT70 4.3 91.2 1.0
C5 J:DT70 4.3 91.3 1.0
N9 J:DG71 4.3 94.4 1.0
C7 J:DT70 4.3 91.1 1.0
C4 J:DG71 4.4 94.5 1.0
N1 J:DT70 4.9 91.6 1.0
C2' J:DT70 4.9 90.3 1.0
C4 J:DT70 5.0 91.4 1.0

Nickel binding site 39 out of 47 in 3mgq

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Nickel binding site 39 out of 47 in the Binding of Nickel Ions to the Nucleosome Core Particle


Mono view


Stereo pair view

A full contact list of Nickel with other atoms in the Ni binding site number 39 of Binding of Nickel Ions to the Nucleosome Core Particle within 5.0Å range:
probe atom residue distance (Å) B Occ
J:Ni84

b:0.2
occ:0.50
O6 J:DG-34 2.3 0.3 1.0
N7 J:DG-35 2.6 0.5 1.0
C6 J:DG-34 3.1 0.6 1.0
C8 J:DG-35 3.3 0.3 1.0
C5 J:DG-35 3.6 0.4 1.0
C5 J:DG-34 3.9 0.5 1.0
NI J:NI87 4.0 87.9 0.3
O6 J:DG-35 4.0 0.1 1.0
N1 J:DG-34 4.0 0.3 1.0
OP2 J:DG-35 4.1 0.0 1.0
C6 J:DG-35 4.1 0.1 1.0
N7 J:DG-34 4.1 0.0 1.0
N9 J:DG-35 4.4 0.1 1.0
C4 J:DG-35 4.5 0.2 1.0
C2' J:DT-36 4.6 0.1 1.0
N4 I:DC34 4.6 0.2 1.0

Nickel binding site 40 out of 47 in 3mgq

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Nickel binding site 40 out of 47 in the Binding of Nickel Ions to the Nucleosome Core Particle


Mono view


Stereo pair view

A full contact list of Nickel with other atoms in the Ni binding site number 40 of Binding of Nickel Ions to the Nucleosome Core Particle within 5.0Å range:
probe atom residue distance (Å) B Occ
J:Ni85

b:0.1
occ:0.23
N7 J:DG24 2.2 0.4 1.0
O6 J:DG25 2.4 0.4 1.0
C8 J:DG24 3.0 0.5 1.0
C5 J:DG24 3.1 0.6 1.0
C6 J:DG25 3.3 0.3 1.0
O6 J:DG24 3.6 0.4 1.0
C6 J:DG24 3.6 0.5 1.0
N7 J:DG25 3.8 0.5 1.0
C5 J:DG25 3.8 0.5 1.0
N9 J:DG24 4.0 0.5 1.0
C4 J:DG24 4.0 0.7 1.0
N4 I:DC-25 4.2 88.1 1.0
OP2 J:DG24 4.2 0.4 1.0
N1 J:DG25 4.4 0.3 1.0
N1 J:DG24 4.9 0.5 1.0

Nickel binding site 41 out of 47 in 3mgq

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Nickel binding site 41 out of 47 in the Binding of Nickel Ions to the Nucleosome Core Particle


Mono view


Stereo pair view

A full contact list of Nickel with other atoms in the Ni binding site number 41 of Binding of Nickel Ions to the Nucleosome Core Particle within 5.0Å range:
probe atom residue distance (Å) B Occ
J:Ni86

b:0.9
occ:0.39
N3 J:DA-70 3.6 0.1 1.0
C5' J:DA-69 4.2 0.3 1.0
N2 I:DG71 4.2 87.5 1.0
C2 J:DA-70 4.3 0.2 1.0
O4' J:DA-70 4.5 0.1 1.0
C1' J:DA-70 4.5 0.7 1.0
O4' I:DA72 4.5 98.7 1.0
O4' J:DA-69 4.6 0.6 1.0
C4 J:DA-70 4.6 0.6 1.0
C4' J:DA-69 4.6 0.3 1.0
N9 J:DA-70 5.0 0.7 1.0

Nickel binding site 42 out of 47 in 3mgq

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Nickel binding site 42 out of 47 in the Binding of Nickel Ions to the Nucleosome Core Particle


Mono view


Stereo pair view

A full contact list of Nickel with other atoms in the Ni binding site number 42 of Binding of Nickel Ions to the Nucleosome Core Particle within 5.0Å range:
probe atom residue distance (Å) B Occ
J:Ni87

b:87.9
occ:0.29
N7 J:DG-34 1.8 0.0 1.0
C8 J:DG-34 2.8 0.2 1.0
C5 J:DG-34 2.9 0.5 1.0
O6 J:DG-34 3.4 0.3 1.0
C6 J:DG-34 3.5 0.6 1.0
NI J:NI84 4.0 0.2 0.5
N9 J:DG-34 4.0 0.1 1.0
C4 J:DG-34 4.1 0.5 1.0
C2' J:DG-35 4.5 99.5 1.0
C8 J:DG-35 4.5 0.3 1.0
N1 J:DG-34 4.9 0.3 1.0
N9 J:DG-35 4.9 0.1 1.0
N7 J:DG-35 5.0 0.5 1.0

Nickel binding site 43 out of 47 in 3mgq

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Nickel binding site 43 out of 47 in the Binding of Nickel Ions to the Nucleosome Core Particle


Mono view


Stereo pair view

A full contact list of Nickel with other atoms in the Ni binding site number 43 of Binding of Nickel Ions to the Nucleosome Core Particle within 5.0Å range:
probe atom residue distance (Å) B Occ
J:Ni88

b:97.9
occ:0.24
N7 J:DG14 2.7 0.9 1.0
C8 J:DG14 3.4 0.9 1.0
O6 I:DG-15 3.6 0.7 1.0
C5 J:DG14 3.8 0.0 1.0
N4 J:DC15 4.0 0.5 1.0
O6 J:DG14 4.2 0.0 1.0
C2' J:DT13 4.3 0.0 1.0
C6 J:DG14 4.4 0.9 1.0
N9 J:DG14 4.7 0.9 1.0
C6 I:DG-15 4.8 0.8 1.0
O3' J:DT13 4.8 1.0 1.0
C4 J:DC15 4.9 0.3 1.0
C4 J:DG14 4.9 0.1 1.0
OP2 J:DG14 4.9 0.2 1.0

Nickel binding site 44 out of 47 in 3mgq

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Nickel binding site 44 out of 47 in the Binding of Nickel Ions to the Nucleosome Core Particle


Mono view


Stereo pair view

A full contact list of Nickel with other atoms in the Ni binding site number 44 of Binding of Nickel Ions to the Nucleosome Core Particle within 5.0Å range:
probe atom residue distance (Å) B Occ
J:Ni89

b:0.6
occ:0.41
N7 J:DA-19 3.1 0.2 1.0
N6 J:DA-19 3.8 1.0 1.0
C8 J:DA-19 4.0 0.1 1.0
C5 J:DA-19 4.0 0.2 1.0
C6 J:DA-19 4.4 0.0 1.0
C8 J:DA-20 4.9 0.9 1.0
N6 J:DA-18 4.9 0.1 1.0
N7 J:DA-20 4.9 0.8 1.0

Nickel binding site 45 out of 47 in 3mgq

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Nickel binding site 45 out of 47 in the Binding of Nickel Ions to the Nucleosome Core Particle


Mono view


Stereo pair view

A full contact list of Nickel with other atoms in the Ni binding site number 45 of Binding of Nickel Ions to the Nucleosome Core Particle within 5.0Å range:
probe atom residue distance (Å) B Occ
J:Ni90

b:0.6
occ:0.49
N7 J:DG52 3.4 0.3 1.0
N7 J:DA51 3.7 0.1 1.0
C8 J:DA51 3.9 0.2 1.0
C8 J:DG52 4.2 0.2 1.0
O6 J:DG52 4.4 0.1 1.0
C5 J:DG52 4.4 0.2 1.0
C5 J:DA51 4.8 0.0 1.0
C6 J:DG52 4.8 0.0 1.0
N9 J:DA51 5.0 0.3 1.0

Nickel binding site 46 out of 47 in 3mgq

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Nickel binding site 46 out of 47 in the Binding of Nickel Ions to the Nucleosome Core Particle


Mono view


Stereo pair view

A full contact list of Nickel with other atoms in the Ni binding site number 46 of Binding of Nickel Ions to the Nucleosome Core Particle within 5.0Å range:
probe atom residue distance (Å) B Occ
J:Ni91

b:88.4
occ:0.07
N7 J:DA-70 3.7 0.1 1.0
C2' J:DC-71 3.8 0.4 1.0
C6 J:DC-71 4.2 0.5 1.0
C8 J:DA-70 4.2 0.2 1.0
OP2 J:DA-70 4.3 0.1 1.0
C1' J:DC-71 4.7 0.2 1.0
N1 J:DC-71 4.8 0.5 1.0
C3' J:DC-71 4.9 0.4 1.0
C5 J:DC-71 4.9 0.3 1.0
C5 J:DA-70 4.9 0.2 1.0

Nickel binding site 47 out of 47 in 3mgq

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Nickel binding site 47 out of 47 in the Binding of Nickel Ions to the Nucleosome Core Particle


Mono view


Stereo pair view

A full contact list of Nickel with other atoms in the Ni binding site number 47 of Binding of Nickel Ions to the Nucleosome Core Particle within 5.0Å range:
probe atom residue distance (Å) B Occ
J:Ni105

b:0.2
occ:0.39
N7 J:DG64 2.2 0.9 1.0
O6 J:DG64 2.8 0.1 1.0
O6 J:DG65 2.8 0.8 1.0
C5 J:DG64 3.0 0.0 1.0
C6 J:DG64 3.2 1.0 1.0
C8 J:DG64 3.4 1.0 1.0
C6 J:DG65 3.5 0.9 1.0
N1 J:DG65 3.8 1.0 1.0
C4 J:DG64 4.3 1.0 1.0
N4 I:DC-65 4.4 0.9 1.0
N9 J:DG64 4.5 0.1 1.0
C5 J:DG65 4.5 0.9 1.0
N1 J:DG64 4.6 0.9 1.0
C5 J:DT63 4.6 0.1 1.0
C7 J:DT63 4.7 0.1 1.0
C6 J:DT63 4.7 0.1 1.0
C2 J:DG65 5.0 0.9 1.0
C4 J:DT63 5.0 0.1 1.0

Reference:

K.Mohideen, R.Muhammad, C.A.Davey. Perturbations in Nucleosome Structure From Heavy Metal Association. Nucleic Acids Res. V. 38 6301 2010.
ISSN: ISSN 0305-1048
PubMed: 20494975
DOI: 10.1093/NAR/GKQ420
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