Atomistry » Nickel » PDB 3qsi-3tsn » 3rqt
Atomistry »
  Nickel »
    PDB 3qsi-3tsn »
      3rqt »

Nickel in PDB 3rqt: 1.5 Angstrom Crystal Structure of the Complex of Ligand Binding Component of Abc-Type Import System From Staphylococcus Aureus with Nickel and Two Histidines

Protein crystallography data

The structure of 1.5 Angstrom Crystal Structure of the Complex of Ligand Binding Component of Abc-Type Import System From Staphylococcus Aureus with Nickel and Two Histidines, PDB code: 3rqt was solved by G.Minasov, A.Halavaty, L.Shuvalova, I.Dubrovska, J.Winsor, O.Kiryukhina, F.Falugi, M.Bottomley, F.Bagnoli, G.Grandi, W.F.Anderson, Center Forstructural Genomics Of Infectious Diseases (Csgid), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 29.91 / 1.50
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 61.941, 66.759, 115.492, 90.00, 90.00, 90.00
R / Rfree (%) 14.1 / 17

Nickel Binding Sites:

The binding sites of Nickel atom in the 1.5 Angstrom Crystal Structure of the Complex of Ligand Binding Component of Abc-Type Import System From Staphylococcus Aureus with Nickel and Two Histidines (pdb code 3rqt). This binding sites where shown within 5.0 Angstroms radius around Nickel atom.
In total only one binding site of Nickel was determined in the 1.5 Angstrom Crystal Structure of the Complex of Ligand Binding Component of Abc-Type Import System From Staphylococcus Aureus with Nickel and Two Histidines, PDB code: 3rqt:

Nickel binding site 1 out of 1 in 3rqt

Go back to Nickel Binding Sites List in 3rqt
Nickel binding site 1 out of 1 in the 1.5 Angstrom Crystal Structure of the Complex of Ligand Binding Component of Abc-Type Import System From Staphylococcus Aureus with Nickel and Two Histidines


Mono view


Stereo pair view

A full contact list of Nickel with other atoms in the Ni binding site number 1 of 1.5 Angstrom Crystal Structure of the Complex of Ligand Binding Component of Abc-Type Import System From Staphylococcus Aureus with Nickel and Two Histidines within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ni473

b:7.3
occ:1.00
ND1 A:HIS471 2.1 6.3 1.0
N A:HIS472 2.1 5.8 1.0
ND1 A:HIS472 2.1 6.1 1.0
O A:HIS471 2.1 8.5 1.0
N A:HIS471 2.1 7.7 1.0
OXT A:HIS472 2.1 6.9 1.0
C A:HIS471 2.8 9.7 1.0
C A:HIS472 2.8 7.5 1.0
CA A:HIS472 2.9 6.4 1.0
CA A:HIS471 2.9 8.3 1.0
CE1 A:HIS471 3.0 10.0 1.0
CE1 A:HIS472 3.1 7.4 1.0
CG A:HIS472 3.1 8.0 1.0
CG A:HIS471 3.1 8.5 1.0
CB A:HIS472 3.5 6.4 1.0
CB A:HIS471 3.5 8.9 1.0
OXT A:HIS471 4.0 10.3 1.0
O A:HIS472 4.0 7.3 1.0
NE2 A:HIS471 4.1 9.8 1.0
NE2 A:HIS472 4.2 8.2 1.0
CD2 A:HIS471 4.2 10.0 1.0
CD2 A:HIS472 4.2 7.1 1.0
O A:SER367 4.2 7.2 1.0
NH2 A:ARG231 4.3 11.4 0.5
NH2 A:ARG322 4.4 9.2 1.0
CD1 A:PHE368 4.7 8.6 1.0
OH A:TYR366 4.7 8.1 1.0
NH1 A:ARG231 4.7 4.8 0.5
CD1 A:LEU14 4.8 12.3 1.0
O A:HOH781 4.9 9.4 1.0

Reference:

G.Minasov, A.Halavaty, L.Shuvalova, I.Dubrovska, J.Winsor, O.Kiryukhina, F.Falugi, M.Bottomley, F.Bagnoli, G.Grandi, W.F.Anderson. 1.5 Angstrom Crystal Structure of the Complex of Ligand Binding Component of Abc-Type Import System From Staphylococcus Aureus with Nickel and Two Histidines. To Be Published.
Page generated: Wed Oct 9 17:46:13 2024

Last articles

Zn in 9JPJ
Zn in 9JP7
Zn in 9JPK
Zn in 9JPL
Zn in 9GN6
Zn in 9GN7
Zn in 9GKU
Zn in 9GKW
Zn in 9GKX
Zn in 9GL0
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy