Nickel in PDB 4kqa: Crystal Structure of the Golgi Casein Kinase

The structure of Crystal Structure of the Golgi Casein Kinase, PDB code: 4kqa was solved by J.Xiao, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	46.46 / 2.60
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	78.786, 157.306, 168.761, 90.00, 90.00, 90.00
R / Rfree (%)	21.7 / 25.4

The binding sites of Nickel atom in the Crystal Structure of the Golgi Casein Kinase (pdb code 4kqa). This binding sites where shown within 5.0 Angstroms radius around Nickel atom.
In total 2 binding sites of Nickel where determined in the Crystal Structure of the Golgi Casein Kinase, PDB code: 4kqa:
Jump to Nickel binding site number: 1; 2;

Nickel binding site 1 out of 2 in the Crystal Structure of the Golgi Casein Kinase


Mono view


Stereo pair view

A full contact list of Nickel with other atoms in the Ni binding site number 1 of Crystal Structure of the Golgi Casein Kinase within 5.0Å range: probe atom residue distance (Å) B Occ A:Ni606 b:47.2 occ:1.00 NE2 A:HIS281 2.1 56.0 1.0 O A:HOH710 2.4 38.7 1.0 O A:HOH701 2.9 27.2 1.0 CD2 A:HIS281 2.9 29.0 1.0 CE1 A:HIS281 3.1 42.0 1.0 CG A:HIS281 4.1 45.2 1.0 ND1 A:HIS281 4.2 43.4 1.0

Nickel binding site 2 out of 2 in the Crystal Structure of the Golgi Casein Kinase


Mono view


Stereo pair view

A full contact list of Nickel with other atoms in the Ni binding site number 2 of Crystal Structure of the Golgi Casein Kinase within 5.0Å range: probe atom residue distance (Å) B Occ B:Ni606 b:42.4 occ:1.00 NE2 B:HIS281 2.1 52.4 1.0 O B:HOH741 2.9 34.0 1.0 CE1 B:HIS281 3.1 41.6 1.0 CD2 B:HIS281 3.1 35.4 1.0 ND1 B:HIS281 4.2 35.5 1.0 CG B:HIS281 4.3 39.2 1.0

J.Xiao, V.S.Tagliabracci, J.Wen, S.A.Kim, J.E.Dixon. Crystal Structure of the Golgi Casein Kinase. Proc.Natl.Acad.Sci.Usa V. 110 10574 2013.
ISSN: ISSN 0027-8424
PubMed: 23754375
DOI: 10.1073/PNAS.1309211110