Nickel in PDB 4kxi: Crystallographic Study of the Complex of Ni(II) Schiff Base Complex and Hew Lysozyme

All present enzymatic activity of Crystallographic Study of the Complex of Ni(II) Schiff Base Complex and Hew Lysozyme:
3.2.1.17;

The structure of Crystallographic Study of the Complex of Ni(II) Schiff Base Complex and Hew Lysozyme, PDB code: 4kxi was solved by B.Koley Seth, A.Ray, S.Basu, S.Biswas, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	25.11 / 2.00
Space group	P 43 21 2
Cell size a, b, c (Å), α, β, γ (°)	77.589, 77.589, 36.390, 90.00, 90.00, 90.00
R / Rfree (%)	24.2 / 25.6

The structure of Crystallographic Study of the Complex of Ni(II) Schiff Base Complex and Hew Lysozyme also contains other interesting chemical elements:

Chlorine

(Cl)

6 atoms

The binding sites of Nickel atom in the Crystallographic Study of the Complex of Ni(II) Schiff Base Complex and Hew Lysozyme (pdb code 4kxi). This binding sites where shown within 5.0 Angstroms radius around Nickel atom.
In total 2 binding sites of Nickel where determined in the Crystallographic Study of the Complex of Ni(II) Schiff Base Complex and Hew Lysozyme, PDB code: 4kxi:
Jump to Nickel binding site number: 1; 2;

Nickel binding site 1 out of 2 in the Crystallographic Study of the Complex of Ni(II) Schiff Base Complex and Hew Lysozyme


Mono view


Stereo pair view

A full contact list of Nickel with other atoms in the Ni binding site number 1 of Crystallographic Study of the Complex of Ni(II) Schiff Base Complex and Hew Lysozyme within 5.0Å range: probe atom residue distance (Å) B Occ A:Ni201 b:90.5 occ:1.00 O2 A:LCP204 2.1 0.4 1.0 OXT A:LEU129 2.7 47.8 1.0 O A:LEU129 2.7 51.4 1.0 CL A:LCP204 3.0 0.8 1.0 C A:LEU129 3.1 50.1 1.0 O4 A:LCP204 3.6 0.7 1.0 O3 A:LCP204 4.0 87.6 1.0 O1 A:LCP204 4.5 0.1 1.0 CA A:LEU129 4.6 44.4 1.0 NZ A:LYS13 4.9 37.2 1.0

Nickel binding site 2 out of 2 in the Crystallographic Study of the Complex of Ni(II) Schiff Base Complex and Hew Lysozyme


Mono view


Stereo pair view

A full contact list of Nickel with other atoms in the Ni binding site number 2 of Crystallographic Study of the Complex of Ni(II) Schiff Base Complex and Hew Lysozyme within 5.0Å range: probe atom residue distance (Å) B Occ A:Ni202 b:64.7 occ:1.00 NI A:SNF202 0.0 64.7 1.0 N8 A:SNF202 1.8 87.4 1.0 N15 A:SNF202 1.8 95.7 1.0 N2 A:SNF202 2.0 0.1 1.0 N19 A:SNF202 2.2 64.1 1.0 OD2 A:ASP52 2.2 29.8 1.0 C1 A:SNF202 2.5 0.1 1.0 C9 A:SNF202 2.5 82.9 1.0 C14 A:SNF202 2.5 0.8 1.0 C20 A:SNF202 2.8 74.7 1.0 C7 A:SNF202 2.9 92.4 1.0 C16 A:SNF202 3.1 83.8 1.0 C3 A:SNF202 3.1 0.8 1.0 CG A:ASP52 3.2 27.9 1.0 C18 A:SNF202 3.4 70.7 1.0 OD1 A:ASP52 3.5 27.9 1.0 O A:HOH356 3.5 45.2 1.0 C10 A:SNF202 3.8 88.3 1.0 C6 A:SNF202 3.8 0.4 1.0 OD1 A:ASN46 3.9 39.0 1.0 O A:HOH357 3.9 36.2 1.0 C21 A:SNF202 4.1 62.8 1.0 C12 A:SNF202 4.1 95.7 1.0 C4 A:SNF202 4.3 0.4 1.0 O A:GLN57 4.4 21.5 1.0 C11 A:SNF202 4.4 91.4 1.0 CB A:ASP52 4.5 28.4 1.0 C5 A:SNF202 4.5 0.1 1.0 CG A:ASN46 4.5 35.3 1.0 O A:HOH360 4.6 51.7 1.0 ND2 A:ASN46 4.6 35.8 1.0 OE1 A:GLU35 4.8 36.9 1.0 OE2 A:GLU35 4.9 34.7 1.0 CB A:GLN57 5.0 25.1 1.0

B.Koley Seth, A.Ray, S.Biswas, S.Basu. Crystallographic Study of the Complex of Ni(II) Schiff Base Complex and Hew Lysozyme To Be Published.