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Nickel in PDB 4laq: Crystal Structures of A Therapeutic Single Chain Antibody in the Free Form and in Complex with Amphetamine and 4-Hydroxymethamphetamine

Protein crystallography data

The structure of Crystal Structures of A Therapeutic Single Chain Antibody in the Free Form and in Complex with Amphetamine and 4-Hydroxymethamphetamine, PDB code: 4laq was solved by R.Celikel, K.Gokulan, E.C.Peterson, K.I.Varughese, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 36.09 / 2.80
Space group P 21 3
Cell size a, b, c (Å), α, β, γ (°) 88.340, 88.340, 88.340, 90.00, 90.00, 90.00
R / Rfree (%) 20.8 / 27

Nickel Binding Sites:

The binding sites of Nickel atom in the Crystal Structures of A Therapeutic Single Chain Antibody in the Free Form and in Complex with Amphetamine and 4-Hydroxymethamphetamine (pdb code 4laq). This binding sites where shown within 5.0 Angstroms radius around Nickel atom.
In total only one binding site of Nickel was determined in the Crystal Structures of A Therapeutic Single Chain Antibody in the Free Form and in Complex with Amphetamine and 4-Hydroxymethamphetamine, PDB code: 4laq:

Nickel binding site 1 out of 1 in 4laq

Go back to Nickel Binding Sites List in 4laq
Nickel binding site 1 out of 1 in the Crystal Structures of A Therapeutic Single Chain Antibody in the Free Form and in Complex with Amphetamine and 4-Hydroxymethamphetamine


Mono view


Stereo pair view

A full contact list of Nickel with other atoms in the Ni binding site number 1 of Crystal Structures of A Therapeutic Single Chain Antibody in the Free Form and in Complex with Amphetamine and 4-Hydroxymethamphetamine within 5.0Å range:
probe atom residue distance (Å) B Occ
L:Ni202

b:0.2
occ:0.33
NE2 L:HIS112 2.2 39.4 1.0
NE2 L:HIS110 2.3 54.4 1.0
CE1 L:HIS112 3.0 38.7 1.0
CD2 L:HIS110 3.2 53.8 1.0
CD2 L:HIS112 3.3 39.1 1.0
CE1 L:HIS110 3.3 53.8 1.0
ND1 L:HIS112 4.2 39.0 1.0
CG L:HIS112 4.3 39.4 1.0
CG L:HIS110 4.4 53.6 1.0
ND1 L:HIS110 4.4 53.6 1.0

Reference:

R.Celical, K.Gokulan, E.C.Peterson, K.I.Varughese. Crystal Structures of A Therapeutic Single Chain Antibody in the Free Form and in Complex with Amphetamine and 4-Hydroxymethamphetamine Plos One 2014.
ISSN: ESSN 1932-6203
Page generated: Wed Dec 16 01:32:36 2020

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