Nickel in PDB 5nzx: Crystal Structure of Dna Cross-Link Repair Protein 1A in Complex with Ceftriaxone (Alternative Site)

The structure of Crystal Structure of Dna Cross-Link Repair Protein 1A in Complex with Ceftriaxone (Alternative Site), PDB code: 5nzx was solved by J.A.Newman, H.Aitkenhead, K.Kupinska, N.A.Burgess-Brown, R.Talon, T.Krojer, F.Von Delft, C.H.Arrowsmith, A.Edwards, C.Bountra, O.Gileadi, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	46.86 / 1.47
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	51.450, 56.550, 113.520, 90.00, 90.00, 90.00
R / Rfree (%)	16.8 / 20.7

The binding sites of Nickel atom in the Crystal Structure of Dna Cross-Link Repair Protein 1A in Complex with Ceftriaxone (Alternative Site) (pdb code 5nzx). This binding sites where shown within 5.0 Angstroms radius around Nickel atom.
In total only one binding site of Nickel was determined in the Crystal Structure of Dna Cross-Link Repair Protein 1A in Complex with Ceftriaxone (Alternative Site), PDB code: 5nzx:

Nickel binding site 1 out of 1 in the Crystal Structure of Dna Cross-Link Repair Protein 1A in Complex with Ceftriaxone (Alternative Site)


Mono view


Stereo pair view

A full contact list of Nickel with other atoms in the Ni binding site number 1 of Crystal Structure of Dna Cross-Link Repair Protein 1A in Complex with Ceftriaxone (Alternative Site) within 5.0Å range: probe atom residue distance (Å) B Occ A:Ni1101 b:24.8 occ:1.00 O A:HOH1361 2.0 25.4 1.0 O A:HOH1310 2.1 25.5 1.0 OD2 A:ASP815 2.2 21.5 1.0 ND1 A:HIS734 2.2 23.3 1.0 NE2 A:HIS732 2.3 21.2 1.0 NE2 A:HIS793 2.3 17.9 1.0 CE1 A:HIS734 3.1 22.0 1.0 O A:HOH1383 3.1 35.2 1.0 CD2 A:HIS732 3.1 21.2 1.0 CE1 A:HIS793 3.2 18.9 1.0 CG A:ASP815 3.3 20.1 1.0 CE1 A:HIS732 3.3 21.9 1.0 CG A:HIS734 3.3 22.6 1.0 CD2 A:HIS793 3.3 17.1 1.0 CB A:ASP815 3.6 16.7 1.0 CB A:HIS734 3.7 24.3 1.0 NE2 A:HIS737 4.1 26.9 1.0 NE2 A:HIS734 4.3 22.1 1.0 CG A:HIS732 4.3 19.7 1.0 ND1 A:HIS732 4.3 19.1 1.0 ND1 A:HIS793 4.3 17.9 1.0 OD1 A:ASP815 4.4 22.3 1.0 CD2 A:HIS734 4.4 23.6 1.0 CE1 A:HIS994 4.4 18.7 1.0 CD2 A:HIS737 4.4 28.0 1.0 CG A:HIS793 4.4 16.5 1.0 NE2 A:HIS994 4.5 18.9 1.0 O A:HOH1265 4.9 38.7 1.0 CE1 A:HIS737 5.0 28.9 1.0

J.A.Newman, H.Aitkenhead, K.Kupinska, N.A.Burgess-Brown, R.Talon, T.Krojer, F.Von Delft, C.H.Arrowsmith, A.Edwards, C.Bountra, O.Gileadi. Crystal Structure of Dna Cross-Link Repair Protein 1A in Complex with Ceftriaxone (Alternative Site) To Be Published.