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Nickel in PDB, part 30 (files: 1161-1200), PDB 5mdk-5ph1

Experimental structures of coordination spheres of Nickel (Ni) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Nickel atoms. PDB files: 1161-1200 (PDB 5mdk-5ph1).
  1. 5mdk (Ni: 1) - Crystal Structure of An O2-Tolerant [Nife]-Hydrogenase From Ralstonia Eutropha in Its As-Isolated Form (Oxidized State - State 3)
    Other atoms: Mg (1); Fe (12); Cl (5);
  2. 5mdl (Ni: 1) - Crystal Structure of An O2-Tolerant [Nife]-Hydrogenase From Ralstonia Eutropha in Its O2-Derivatized Form By A "Soak-and-Freeze" Derivatization Method
    Other atoms: Mg (1); Fe (12); Cl (1);
  3. 5mg0 (Ni: 1) - Structure of Pas-Gaf Fragment of Deinococcus Phytochrome By Serial Femtosecond Crystallography
    Other atoms: Cl (2);
  4. 5mkc (Ni: 3) - Crystal Structure of the Rrga Jo.in Complex
    Other atoms: Ca (3);
  5. 5mle (Ni: 2) - Crystal Structure of Human Dihydropyrimidinease-Like 2 (DPYSL2A) /Collapsin Response Mediator Protein (CRMP2 13-516) Mutant Y479E/Y499E
  6. 5mtc (Ni: 2) - Crystal Structure of Pdf From the Vibrio Parahaemolyticus Bacteriophage VP16T - Crystal Form I
    Other atoms: Zn (2);
  7. 5mtd (Ni: 3) - Crystal Structure of Pdf From the Vibrio Parahaemolyticus Bacteriophage VP16T - Crystal Form II
    Other atoms: Zn (2);
  8. 5mte (Ni: 3) - Crystal Structure of Pdf From the Vibrio Parahaemolyticus Bacteriophage VP16T in Complex with Actinonin - Crystal Form II
    Other atoms: Zn (2);
  9. 5mts (Ni: 2) - Complex of Fimh Lectin with A Tazman (Thiazolylaminomannosides) Family Member Known As Potent Anti-Adhesive Agent at 2.6 A Resolution
  10. 5mx0 (Ni: 2) - Crystal Structure of Human Fibromodulin
    Other atoms: Cl (2);
  11. 5mx1 (Ni: 2) - Crystal Structure of Human Chondroadherin
    Other atoms: Cl (1);
  12. 5n16 (Ni: 5) - First Bromodomain (BD1) From Candida Albicans BDF1 Bound to A Dibenzothiazepinone (Compound 1)
  13. 5n1q (Ni: 2) - Methyl-Coenzyme M Reductase III From Methanothermococcus Thermolithotrophicus at 1.9 A Resolution
    Other atoms: Mg (1); K (1);
  14. 5n28 (Ni: 2) - Methyl-Coenzyme M Reductase III From Methanotorris Formicicus Monoclinic Form
    Other atoms: K (1);
  15. 5n2a (Ni: 1) - Methyl-Coenzyme M Reductase III From Methanotorris Formicicus Trigonal Form
    Other atoms: K (1); Br (1);
  16. 5nfk (Ni: 1) - Crystal Structure of Yrba From Sinorhizobium Meliloti in Complex with Nickel.
  17. 5nhd (Ni: 12) - Crystal Structure of Xylose Isomerase From Piromyces E2 in Complex with 2 NI2+ Ions and Xylose
  18. 5ns1 (Ni: 2) - Cys-Gly Dipeptidase Glij in Complex with NI2+
    Other atoms: Cl (1);
  19. 5nsw (Ni: 1) - Xenon For Tunnelling Analysis of the Efflux Pump Component Oprn.
    Other atoms: Xe (17); Na (1);
  20. 5nzw (Ni: 1) - Crystal Structure of Dna Cross-Link Repair Protein 1A in Complex with Ceftriaxone
  21. 5nzx (Ni: 1) - Crystal Structure of Dna Cross-Link Repair Protein 1A in Complex with Ceftriaxone (Alternative Site)
  22. 5nzy (Ni: 1) - Crystal Structure of Dna Cross-Link Repair Protein 1A in Complex with Cefotaxime
  23. 5nzz (Ni: 6) - Crystal Structure of Phosphorylated P38AMAPK in Complex with TAB1
    Other atoms: Mg (6);
  24. 5o59 (Ni: 4) - Cellobiohydrolase CEL7A From T. Atroviride
  25. 5o5d (Ni: 4) - Cellobiohydrolase CEL7A From T. Atroviride
    Other atoms: Cl (4);
  26. 5o7y (Ni: 1) - Thebaine 6-O-Demethylase (T6ODM) From Papaver Somniferum in Complex with Succinate
  27. 5o9w (Ni: 1) - Thebaine 6-O-Demethylase (T6ODM) From Papaver Somniferum in Complex with 2-Oxoglutarate
    Other atoms: Na (1);
  28. 5oa4 (Ni: 1) - Fe(II)/(Alpha)Ketoglutarate-Dependent Dioxygenase ASQJ_V72I Mutant in Complex with 4-Methoxycyclopeptin (1)
    Other atoms: Cl (1);
  29. 5oa7 (Ni: 1) - Fe(II)/(Alpha)Ketoglutarate-Dependent Dioxygenase ASQJ_V72I Mutant in Complex with Cyclopeptin (1B)
  30. 5oa8 (Ni: 1) - Fe(II)/(Alpha)Ketoglutarate-Dependent Dioxygenase ASQJ_V72I Mutant in Complex with Demethylated Cyclopeptin (1D)
  31. 5odc (Ni: 2) - Heterodisulfide Reductase / [Nife]-Hydrogenase Complex From Methanothermococcus Thermolithotrophicus at 2.3 A Resolution
    Other atoms: Mg (2); Fe (110); Ca (2); Na (2);
  32. 5odh (Ni: 2) - Heterodisulfide Reductase / [Nife]-Hydrogenase Complex From Methanothermococcus Thermolithotrophicus Soaked with Heterodisulfide For 3.5 Minutes
    Other atoms: Fe (113);
  33. 5odi (Ni: 2) - Heterodisulfide Reductase / [Nife]-Hydrogenase Complex From Methanothermococcus Thermolithotrophicus Cocrystallized with Com-Sh
    Other atoms: Fe (112);
  34. 5odq (Ni: 2) - Heterodisulfide Reductase / [Nife]-Hydrogenase Complex From Methanothermococcus Thermolithotrophicus Soaked with Bromoethanesulfonate.
    Other atoms: Br (4); Fe (113);
  35. 5odr (Ni: 2) - Heterodisulfide Reductase / [Nife]-Hydrogenase Complex From Methanothermococcus Thermolithotrophicus Soaked with Heterodisulfide For 2 Minutes.
    Other atoms: Fe (113);
  36. 5ol4 (Ni: 2) - 1.28 A Resolution of Sporosarcina Pasteurii Urease Inhibited in the Presence of Nbpt
  37. 5oll (Ni: 4) - Crystal Structure of Gurmarin, A Sweet Taste Suppressing Polypeptide
  38. 5om8 (Ni: 1) - Crystal Form 2 of ALPHA1-Antichymotrypsin Variant Dbs-II-Allo: An Allosterically Modulated Drug-Binding Serpin For Doxorubicin
    Other atoms: Cl (1);
  39. 5ph0 (Ni: 1) - Pandda Analysis Group Deposition -- Crystal Structure of JMJD2D in Complex with N09484A
    Other atoms: F (3); Mg (1); Zn (1);
  40. 5ph1 (Ni: 1) - Pandda Analysis Group Deposition -- Crystal Structure of JMJD2D in Complex with N09449A
    Other atoms: F (1); Zn (1);
Page generated: Sat Apr 3 17:58:52 2021

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