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Nickel in PDB 5way: Mgaspn Protein, Mga Regulator From Streptococcus Pneumoniae

Protein crystallography data

The structure of Mgaspn Protein, Mga Regulator From Streptococcus Pneumoniae, PDB code: 5way was solved by J.Osipiuk, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 49.51 / 2.09
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 80.118, 106.256, 100.213, 90.00, 101.76, 90.00
R / Rfree (%) 19.3 / 23.2

Other elements in 5way:

The structure of Mgaspn Protein, Mga Regulator From Streptococcus Pneumoniae also contains other interesting chemical elements:

Potassium (K) 1 atom

Nickel Binding Sites:

The binding sites of Nickel atom in the Mgaspn Protein, Mga Regulator From Streptococcus Pneumoniae (pdb code 5way). This binding sites where shown within 5.0 Angstroms radius around Nickel atom.
In total only one binding site of Nickel was determined in the Mgaspn Protein, Mga Regulator From Streptococcus Pneumoniae, PDB code: 5way:

Nickel binding site 1 out of 1 in 5way

Go back to Nickel Binding Sites List in 5way
Nickel binding site 1 out of 1 in the Mgaspn Protein, Mga Regulator From Streptococcus Pneumoniae


Mono view


Stereo pair view

A full contact list of Nickel with other atoms in the Ni binding site number 1 of Mgaspn Protein, Mga Regulator From Streptococcus Pneumoniae within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ni702

b:48.4
occ:1.00
NE2 A:HIS292 2.0 45.5 1.0
OD1 A:ASP296 2.1 45.2 1.0
O A:HOH861 2.1 45.7 1.0
CE1 A:HIS292 3.0 47.5 1.0
CG A:ASP296 3.0 48.1 1.0
CD2 A:HIS292 3.1 44.2 1.0
OD2 A:ASP296 3.3 47.6 1.0
O A:HOH886 3.9 59.7 1.0
ND1 A:HIS292 4.1 46.4 1.0
CG A:HIS292 4.2 45.1 1.0
CB A:ASP296 4.4 46.3 1.0

Reference:

J.Osipiuk, J.Osipiuk. N/A N/A.
Page generated: Thu Oct 10 08:09:00 2024

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