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Nickel in PDB, part 45 (files: 1761-1800), PDB 5tvr-5xgz

Experimental structures of coordination spheres of Nickel (Ni) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Nickel atoms. PDB files: 1761-1800 (PDB 5tvr-5xgz).
  1. 5tvr (Ni: 2) - JMJD2A in Complex with Ni(II) and Alpha-Ketoglutarate
    Other atoms: Zn (2);
  2. 5tvs (Ni: 2) - JMJD2A in Complex with Ni(II)
    Other atoms: Zn (2);
  3. 5u7h (Ni: 5) - Ni-Bound Dihydroneopterin Triphosphate Pyrophosphohydrolase From E. Coli
  4. 5u93 (Ni: 2) - Structure of the Regulatory Domain of the Arac Family Transcriptional Activator Rhar
  5. 5u9e (Ni: 2) - Structure of the Regulatory Domain of the Arac Family Transcriptional Activator Rhar
  6. 5udw (Ni: 11) - Lare, A Sulfur Transferase Involved in Synthesis of the Cofactor For Lactate Racemase, in Complex with Nickel
  7. 5up7 (Ni: 5) - Crystal Structure of the Ni-Bound Human Heavy-Chain Ferritin 122H- Delta C-Star Variant
    Other atoms: Ca (2); Cl (1);
  8. 5v2p (Ni: 1) - Cav BETA2A Subunit: CAV1.2 Aid-Cap Complex
  9. 5v2v (Ni: 1) - Ethylene Forming Enzyme in Complex with Nickel
  10. 5v9p (Ni: 1) - Crystal Structure of Pyrrolidine Amide Inhibitor [(3S)-3-(4-Bromo-1H- Pyrazol-1-Yl)Pyrrolidin-1-Yl][3-(Propan-2-Yl)-1H-Pyrazol-5- Yl]Methanone (Compound 35) in Complex with KDM5A
    Other atoms: Zn (2); Br (1);
  11. 5v9t (Ni: 2) - Crystal Structure of Selective Pyrrolidine Amide KDM5A Inhibitor N- {(3R)-1-[3-(Propan-2-Yl)-1H-Pyrazole-5-Carbonyl]Pyrrolidin-3- Yl}Cyclopropanecarboxamide (Compound 48)
    Other atoms: Zn (4);
  12. 5vb0 (Ni: 6) - Crystal Structure of Fosfomycin Resistance Protein FOSA3
    Other atoms: Mn (8);
  13. 5vfb (Ni: 2) - 1.36 Angstrom Resolution Crystal Structure of Malate Synthase G From Pseudomonas Aeruginosa in Complex with Glycolic Acid.
    Other atoms: Cl (10); Na (2);
  14. 5vgi (Ni: 4) - Crystal Structure of KDM4 with the Small Molecule Inhibitor QC6352
    Other atoms: Zn (4);
  15. 5vmp (Ni: 4) - Crystal Structure of Human KDM4 with Small Molecule Inhibitor QC5714
    Other atoms: Zn (4);
  16. 5vp3 (Ni: 1) - Light-Sensitive Photoprotein
    Other atoms: Cd (4);
  17. 5vvl (Ni: 22) - CAS1-CAS2 Bound to Full-Site Mimic with Ni
  18. 5w1f (Ni: 6) - Crystal Structure of Ni(II)- and Ca(II)-Bound Human Calprotectin
    Other atoms: Ca (10); Na (6);
  19. 5way (Ni: 1) - Mgaspn Protein, Mga Regulator From Streptococcus Pneumoniae
    Other atoms: K (1);
  20. 5wja (Ni: 1) - Crystal Structure of H107A Peptidylglycine Alpha-Hydroxylating Monooxygenase (Phm) in Complex with Citrate
    Other atoms: Cu (3);
  21. 5wk0 (Ni: 1) - Crystal Structure of the Bacillithiol Transferase Bsta From Staphylococcus Aureus.
  22. 5wrk (Ni: 2) - MU2 Subunit of the Clathrin Adaptor Complex AP2 in Complex with Irs-1 Y608 Peptide
  23. 5wtq (Ni: 4) - Crystal Structure of Human Proteasome-Assembling Chaperone PAC4
    Other atoms: Cl (4);
  24. 5wwx (Ni: 1) - Crystal Structure of the KH2 Domain of Human Rna-Binding E3 Ubiquitin- Protein Ligase Mex-3C Complex with Rna
  25. 5wxk (Ni: 1) - Earp Bound with Domain I of Ef-P
  26. 5x2r (Ni: 6) - Direct Observation of Conformational Population Shifts in Hemoglobin: Crystal Structure of Half-Liganded Hemoglobin After Adding 10 Mm Phosphate pH 6.9.
    Other atoms: Fe (6);
  27. 5x2s (Ni: 6) - Direct Observation of Conformational Population Shifts in Hemoglobin: Crystal Structure of Half-Liganded Hemoglobin After Adding 4 Mm Bezafibrate pH 6.5.
    Other atoms: Fe (6); Cl (1);
  28. 5x2t (Ni: 6) - Direct Observation of Conformational Population Shifts in Hemoglobin: Crystal Structure of Half-Liganded Hemoglobin After Adding 4 Mm Bezafibrate pH 7.2.
    Other atoms: Fe (6); Cl (1);
  29. 5x2u (Ni: 6) - Direct Observation of Conformational Population Shifts in Hemoglobin: Crystal Structure of Half-Liganded Hemoglobin After Adding 80 Mm Phosphate pH 6.7.
    Other atoms: Fe (6);
  30. 5x57 (Ni: 1) - Structure of Gar Domain of ACF7
  31. 5x7o (Ni: 2) - Crystal Structure of Paenibacillus Sp. 598K Alpha-1,6- Glucosyltransferase
    Other atoms: Mg (15); Ca (6);
  32. 5x7p (Ni: 2) - Crystal Structure of Paenibacillus Sp. 598K Alpha-1,6- Glucosyltransferase Complexed with Acarbose
    Other atoms: Mg (12); Ca (6);
  33. 5x7q (Ni: 2) - Crystal Structure of Paenibacillus Sp. 598K Alpha-1,6- Glucosyltransferase Complexed with Maltohexaose
    Other atoms: Mg (12); Ca (6);
  34. 5x7r (Ni: 4) - Crystal Structure of Paenibacillus Sp. 598K Alpha-1,6- Glucosyltransferase Complexed with Isomaltohexaose
    Other atoms: Mg (20); Ca (6);
  35. 5x7s (Ni: 2) - Crystal Structure of Paenibacillus Sp. 598K Alpha-1,6- Glucosyltransferase, Terbium Derivative
    Other atoms: Mg (7); Tb (7); Ca (6);
  36. 5xew (Ni: 3) - Crystal Structure of the [NI2+-(Chromomycin A3)2]-Ccg Repeats Complex
  37. 5xf9 (Ni: 2) - Crystal Structure of Nad+-Reducing [Nife]-Hydrogenase in the Air- Oxidized State
    Other atoms: Mg (2); Fe (38);
  38. 5xfa (Ni: 2) - Crystal Structure of Nad+-Reducing [Nife]-Hydrogenase in the H2- Reduced State
    Other atoms: Mg (2); Fe (38);
  39. 5xgf (Ni: 1) - The Fatty Acid-Responsive Fadr Repressor of Vibrio Alginolyticus
  40. 5xgz (Ni: 4) - Metagenomic Glucose-Tolerant Glycosidase
Page generated: Mon Jan 25 15:57:20 2021

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