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Nickel in PDB 7stc: AQP5 T41H with NI2+

Protein crystallography data

The structure of AQP5 T41H with NI2+, PDB code: 7stc was solved by T.Kowatz, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 34.22 / 2.25
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 89.681, 90.649, 184.767, 90, 90, 90
R / Rfree (%) 28.6 / 31.1

Nickel Binding Sites:

The binding sites of Nickel atom in the AQP5 T41H with NI2+ (pdb code 7stc). This binding sites where shown within 5.0 Angstroms radius around Nickel atom.
In total only one binding site of Nickel was determined in the AQP5 T41H with NI2+, PDB code: 7stc:

Nickel binding site 1 out of 1 in 7stc

Go back to Nickel Binding Sites List in 7stc
Nickel binding site 1 out of 1 in the AQP5 T41H with NI2+


Mono view


Stereo pair view

A full contact list of Nickel with other atoms in the Ni binding site number 1 of AQP5 T41H with NI2+ within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ni301

b:118.7
occ:1.00
ND1 B:HIS41 3.5 51.1 1.0
ND1 D:HIS41 3.6 50.0 1.0
CE1 B:HIS41 3.7 51.4 1.0
CE1 D:HIS41 3.8 50.6 1.0
CE1 A:HIS41 4.1 60.3 1.0
ND1 A:HIS41 4.1 59.9 1.0
ND1 C:HIS41 4.4 61.1 1.0
CE1 C:HIS41 4.5 61.5 1.0
CG B:HIS41 4.6 48.7 1.0
CG D:HIS41 4.7 48.2 1.0
NE2 B:HIS41 4.7 50.6 1.0
NE2 D:HIS41 4.8 49.9 1.0
NE2 A:HIS41 4.9 60.0 1.0
CG A:HIS41 5.0 57.7 1.0

Reference:

T.Kowatz, D.Lodowski, A.Vahedi-Faridi. AQP5 T41H with NI2+ To Be Published.
Page generated: Fri Apr 7 19:18:02 2023

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