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Nickel in PDB 7u0v: Structure of Myxoma Virus M062 Protein Variant Lau

Protein crystallography data

The structure of Structure of Myxoma Virus M062 Protein Variant Lau, PDB code: 7u0v was solved by P.O'byrne, A.R.Khan, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 47.41 / 2.45
Space group P 64
Cell size a, b, c (Å), α, β, γ (°) 94.827, 94.827, 44.136, 90, 90, 120
R / Rfree (%) 21.1 / 26.6

Nickel Binding Sites:

The binding sites of Nickel atom in the Structure of Myxoma Virus M062 Protein Variant Lau (pdb code 7u0v). This binding sites where shown within 5.0 Angstroms radius around Nickel atom.
In total only one binding site of Nickel was determined in the Structure of Myxoma Virus M062 Protein Variant Lau, PDB code: 7u0v:

Nickel binding site 1 out of 1 in 7u0v

Go back to Nickel Binding Sites List in 7u0v
Nickel binding site 1 out of 1 in the Structure of Myxoma Virus M062 Protein Variant Lau


Mono view


Stereo pair view

A full contact list of Nickel with other atoms in the Ni binding site number 1 of Structure of Myxoma Virus M062 Protein Variant Lau within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ni201

b:117.8
occ:1.00
N A:SER-1 2.1 112.1 1.0
ND1 A:HIS0 2.2 123.5 1.0
N A:HIS0 2.2 119.2 1.0
N A:GLY-2 2.4 115.5 1.0
C A:GLY-2 2.8 115.8 1.0
C A:SER-1 2.8 114.5 1.0
CA A:SER-1 2.9 111.2 1.0
CE1 A:HIS0 3.0 127.5 1.0
CA A:GLY-2 3.1 111.9 1.0
CG A:HIS0 3.2 117.4 1.0
CA A:HIS0 3.2 117.4 1.0
N A:MET1 3.5 122.3 1.0
CB A:HIS0 3.6 112.7 1.0
C A:HIS0 3.8 115.4 1.0
O A:GLY-2 3.8 124.0 1.0
O A:SER-1 3.9 117.2 1.0
NE2 A:HIS0 4.1 124.6 1.0
CB A:SER-1 4.1 114.6 1.0
CD2 A:HIS0 4.2 124.2 1.0
OG A:SER-1 4.3 115.3 1.0
CG A:MET1 4.4 132.2 1.0
CA A:MET1 4.6 118.5 1.0
CB A:MET1 4.6 121.7 1.0
O A:HIS0 5.0 105.6 1.0

Reference:

P.O'byrne, A.R.Khan. Structure of Myxoma Virus M062 Protein Variant Mav To Be Published.
Page generated: Thu Oct 10 09:24:56 2024

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