Nickel in PDB 8ji5: Crystal Structure of Aetd in Complex with 5-Bromo-L-Tryptophan and Two FE2+

The structure of Crystal Structure of Aetd in Complex with 5-Bromo-L-Tryptophan and Two FE2+, PDB code: 8ji5 was solved by H.Li, L.Dai, H.B.Zheng, C.-C.Chen, R.-T.Guo, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	22.77 / 2.01
Space group	P 41
Cell size a, b, c (Å), α, β, γ (°)	65.633, 65.633, 117.313, 90, 90, 90
R / Rfree (%)	20.6 / 27.3

The structure of Crystal Structure of Aetd in Complex with 5-Bromo-L-Tryptophan and Two FE2+ also contains other interesting chemical elements:

Bromine	(Br)	2 atoms
Iron	(Fe)	4 atoms

The binding sites of Nickel atom in the Crystal Structure of Aetd in Complex with 5-Bromo-L-Tryptophan and Two FE2+ (pdb code 8ji5). This binding sites where shown within 5.0 Angstroms radius around Nickel atom.
In total only one binding site of Nickel was determined in the Crystal Structure of Aetd in Complex with 5-Bromo-L-Tryptophan and Two FE2+, PDB code: 8ji5:

Nickel binding site 1 out of 1 in the Crystal Structure of Aetd in Complex with 5-Bromo-L-Tryptophan and Two FE2+


Mono view


Stereo pair view

A full contact list of Nickel with other atoms in the Ni binding site number 1 of Crystal Structure of Aetd in Complex with 5-Bromo-L-Tryptophan and Two FE2+ within 5.0Å range: probe atom residue distance (Å) B Occ A:Ni304 b:78.2 occ:1.00 NE2 A:HIS125 2.0 41.7 1.0 NE2 B:HIS125 2.2 48.2 1.0 O B:HOH427 2.4 35.3 1.0 OD2 B:ASP126 2.7 69.8 1.0 CE1 A:HIS125 2.8 43.2 1.0 OD2 A:ASP126 3.1 56.5 1.0 CE1 B:HIS125 3.1 47.6 1.0 CD2 A:HIS125 3.1 36.5 1.0 CD2 B:HIS125 3.2 47.2 1.0 CG A:ASP126 3.4 54.7 1.0 CG B:ASP126 3.9 60.6 1.0 OD1 A:ASP126 3.9 58.9 1.0 ND1 A:HIS125 3.9 38.1 1.0 O B:HOH478 4.0 48.5 1.0 CB A:ASP126 4.1 50.6 1.0 CG A:HIS125 4.1 35.8 1.0 ND1 B:HIS125 4.3 46.2 1.0 CG B:HIS125 4.3 46.0 1.0 CB B:ASP126 4.5 55.4 1.0 O A:VAL122 4.9 29.3 1.0 OD1 B:ASP126 4.9 64.7 1.0

H.Li, L.Dai, H.B.Zheng, C.-C.Chen, R.-T.Guo. Crystal Structure of Aetd in Complex with 5-Bromo-L-Tryptophan and Two FE2+ To Be Published.