Nickel in PDB, part 46 (files: 1801-1840),
PDB 5xkt-6c8z
Experimental structures of coordination spheres of Nickel (Ni) in bioorganic
molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius
around Nickel atoms. PDB files: 1801-1840 (PDB 5xkt-6c8z).
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5xkt (Ni: 3) - Klebsiella Pneumoniae Ureg in Complex with Gmppnp and Nickel
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5xle (Ni: 1) - Crystal Structure of Anaerobically Purified and Anaerobically Crystallized D. Vulgaris Miyazaki F [Nife]-Hydrogenase
Other atoms:
Mg (1);
Fe (12);
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5xlf (Ni: 1) - Crystal Structure of Aerobically Purified and Aerobically Crystallized D. Vulgaris Miyazaki F [Nife]-Hydrogenase
Other atoms:
Mg (1);
Fe (12);
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5xlg (Ni: 1) - Crystal Structure of Anaerobically Purified and Aerobically Crystallized D. Vulgaris Miyazaki F [Nife]-Hydrogenase
Other atoms:
Mg (1);
Fe (12);
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5xlh (Ni: 1) - Crystal Structure of Aerobically Purified and Aerobically Crystallized For 12WEEKS D. Vulgaris Miyazaki F [Nife]-Hydrogenase
Other atoms:
Mg (1);
Fe (12);
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5xvb (Ni: 2) - [Nife]-Hydrogenase (Hyb-Type) From Citrobacter Sp. S-77 in An H2- Reduced Condition
Other atoms:
Mg (2);
Fe (24);
-
5xvc (Ni: 2) - [Nife]-Hydrogenase (Hyb-Type) From Citrobacter Sp. S-77 in A Ferricyanide-Oxidized Condition
Other atoms:
Mg (2);
Fe (24);
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5xvd (Ni: 2) - [Nife]-Hydrogenase (Hyb-Type) From Citrobacter Sp. S-77 in An Air- Oxidized Condition
Other atoms:
Mg (2);
Fe (32);
Na (2);
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5y2j (Ni: 2) - Crystal Structure of the Oligomerization Domain of NSP4 From Rotavirus Strain MF66
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5y34 (Ni: 2) - Membrane-Bound Respiratory [Nife]-Hydrogenase From Hydrogenovibrio Marinus in A Ferricyanide-Oxidized Condition
Other atoms:
Mg (2);
Fe (26);
-
5y4n (Ni: 1) - Crystal Structure of Aerobically Purified and Anaerobically Crystallized D. Vulgaris Miyazaki F [Nife]-Hydrogenase
Other atoms:
Mg (1);
Fe (12);
-
5y9r (Ni: 2) - Crystal Structure of the Oligomerization Domain of NSP4 From Rotavirus Strain MF66
Other atoms:
Cd (1);
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5yh8 (Ni: 1) - The Crystal Structure of Staphylococcus Aureus Cnta in Complex with Staphylopine and Nickel
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5yir (Ni: 10) - Crystal Structure of Ankb Lir/Gabarap Complex
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5ykn (Ni: 1) - Crystal Structure of Arabidopsis Thaliana JMJ14 Catalytic Domain
Other atoms:
Zn (2);
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5yko (Ni: 1) - Crystal Structure of Arabidopsis Thaliana JMJ14 Catalytic Domain in Complex with Nog and H3K4ME3 Peptide
Other atoms:
Zn (2);
-
5yng (Ni: 2) - Crystal Structure of SZ348 in Complex with Cyclopentene Oxide
Other atoms:
K (2);
-
5yqw (Ni: 1) - Structure and Function of A Novel Periplasmic Chitooligosaccharide- Binding Protein From Marine Vibrio Bacteria
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5zc7 (Ni: 1) - Crystal Structure of Aprt From Y. Pseudotuberculosis with Bound Adenine (P63 Space Group).
Other atoms:
Cl (3);
Na (2);
-
5zq8 (Ni: 2) - Crystal Structure of Sprlmcd with U747 Stemloop Rna
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5zt9 (Ni: 4) - Sirb From Bacillus Subtilis with NI2+
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5zyp (Ni: 3) - Structure of the Yeast CTR9/PAF1 Complex
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6a1i (Ni: 1) - Crystal Structure of A Synthase 1 From Santalum Album
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6a6f (Ni: 6) - Crystal Structure of Putative Iron-Sulfur Cluster Assembly Scaffold Protein For Suf System (Fisufu) From Thermophilic Fervidobacterium Islandicum Aw-1
Other atoms:
Zn (2);
-
6ao6 (Ni: 1) - Crystal Structure of H108A Peptidylglycine Alpha-Hydroxylating Monooxygenase (Phm)
Other atoms:
Cu (1);
-
6apz (Ni: 1) - Crystal Structure of Mycobacterium Tuberculosis Malate Synthase in Complex with 3-Hydroxy-Phenyldiketoacid
Other atoms:
Mg (1);
-
6asr (Ni: 4) - REV1 UBM2 Domain Complex with Ubiquitin
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6asu (Ni: 1) - Crystal Structure of Mycobacterium Tuberculosis Malate Synthase in Complex with 4-Methyl-Phenyldiketoacid
Other atoms:
Mg (1);
-
6b6v (Ni: 2) - Crystal Structure of Desulfovibrio Vulgaris Carbon Monoxide Dehydrogenase, As-Isolated (Protein Batch 1), Canonical C-Cluster
Other atoms:
Fe (18);
-
6b6w (Ni: 2) - Crystal Structure of Desulfovibrio Vulgaris Carbon Monoxide Dehydrogenase, As-Isolated (Protein Batch 2), Oxidized C-Cluster
Other atoms:
Mg (4);
Fe (26);
Cl (2);
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6b6x (Ni: 2) - Crystal Structure of Desulfovibrio Vulgaris Carbon Monoxide Dehydrogenase, Dithionite-Reduced (Protein Batch 2), Canonical C- Cluster
Other atoms:
Mg (4);
Fe (18);
Cl (3);
-
6b6y (Ni: 2) - Crystal Structure of Desulfovibrio Vulgaris Carbon Monoxide Dehydrogenase, Dithionite-Reduced Then Oxygen-Exposed (Protein Batch 2), Oxidized C-Cluster
Other atoms:
Fe (18);
-
6bi4 (Ni: 2) - 2.9 Angstrom Resolution Crystal Structure of Dtdp-Glucose 4,6- Dehydratase (Rfbb) From Bacillus Anthracis Str. Ames in Complex with Nad.
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6bn1 (Ni: 1) - Salvador Hippo Sarah Domain Complex
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6br6 (Ni: 1) - N2 Neuraminidase in Complex with A Novel Antiviral Compound
Other atoms:
Ca (1);
-
6btx (Ni: 1) - Structure of A Bacterial Metal Transporter
Other atoms:
Ca (1);
-
6bwr (Ni: 4) - LARC2, the C-Terminal Domain of A Cyclometallase Involved in the Synthesis of the Npn Cofactor of Lactate Racemase, in Complex with Nickel
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6c1w (Ni: 3) - A Tethered Niacin-Derived Pincer Complex with A Nickel-Carbon or Sulfite-Carbon Bond in Lactate Racemase
-
6c5i (Ni: 2) - Unliganded S25-5 Fab
Other atoms:
Cl (1);
-
6c8z (Ni: 3) - Last Common Ancestor of Adp-Dependent Phosphofructokinases From Methanosarcinales
Other atoms:
Mg (1);
Page generated: Thu Oct 10 11:28:58 2024
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