Nickel in PDB, part 29 (files: 1121-1160),
PDB 5i8s-5mdj
Experimental structures of coordination spheres of Nickel (Ni) in bioorganic
molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius
around Nickel atoms. PDB files: 1121-1160 (PDB 5i8s-5mdj).
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5i8s (Ni: 1) - Structure of Mouse Acireductone Dioxygenase with NI2+ Ion and Pentanoic Acid in the Active Site
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5i8t (Ni: 1) - Structure of Mouse Acireductone Dioxygenase with NI2+ Ion and D-Lactic Acid in the Active Site
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5i91 (Ni: 1) - Structure of Mouse Acirecutone Dioxygenase with to NI2+ and 2-Keto-4- (Methylthio)-Butyric Acid in the Active Site
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5i93 (Ni: 1) - Structure of Mouse Acireductone Dioxygenase with NI2+ and 2- Ketopentanoic Acid in the Active Site
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5ib4 (Ni: 2) - Crystal Structure of Hla-B*27:05 Complexed with the Self-Peptide Pvipr and Nickel
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5ihy (Ni: 2) - The Crystal Structure of Bacillus Subtilis Semet-Ypgq
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5j4r (Ni: 1) - WELO5 Small Molecule Halogenase with Ni(II) and 2-Oxoglutarate
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5j7m (Ni: 2) - Crystal Structure of Cupin 2 Conserved Barrel Domain Protein From Kribbella Flavida Dsm 17836
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5jey (Ni: 8) - Crystal Structure of Type 2 Pdf From Streptococcus Agalactiae, Crystallized in Cacodylate Buffer
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5jf0 (Ni: 8) - Crystal Structure of Type 2 Pdf From Streptococcus Agalactiae in Complex with Tripeptide Met-Ala-Arg
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5jig (Ni: 1) - Crytsal Structure of WSS1 From S. Pombe
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5jjt (Ni: 6) - Crystal Structure of A Type 5 Serine/Threonine Protein Phosphatase From Arabidopsis Thaliana
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5jlw (Ni: 6) - Antphd with 15BP Dna Duplex R-Monothioated at Cytidine-8
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5jlx (Ni: 3) - Antphd with 15BP Dna Duplex S-Monothioated at Cytidine-8
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5jou (Ni: 1) - Bacteroides Ovatus Xyloglucan Pul GH31
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5jov (Ni: 1) - Bacteroides Ovatus Xyloglucan Pul GH31 with Bound 5FIDOF
Other atoms:
F (1);
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5jpt (Ni: 1) - Crystal Structure of the PRP43P Deah-Box Rna Helicase in Complex with Cdp
Other atoms:
Mg (2);
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5jrd (Ni: 2) - E. Coli Hydrogenase-1 Variant P508A
Other atoms:
Mg (2);
Fe (26);
Cl (4);
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5jsh (Ni: 1) - The 3D Structure of Recombinant [Nifese] Hydrogenase From Desulfovibrio Vulgaris Hildenborough in the Oxidized State at 1.30 Angstrom
Other atoms:
Fe (18);
Cl (1);
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5jsk (Ni: 2) - The 3D Structure of [Nifese] Hydrogenase From Desulfovibrio Vulgaris Hildenborough in the Reduced State at 0.95 Angstrom Resolution
Other atoms:
Fe (14);
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5jsu (Ni: 1) - The 3D Structure of the U489C Variant of [Nifese] Hydrogenase From Desulfovibrio Vulgaris Hildenborough in the Oxidized State at 1.40 Angstrom Resolution
Other atoms:
Fe (18);
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5jsy (Ni: 3) - The 3D Structure of the Ni-Reconstituted U489C Variant of [Nifese] Hydrogenase From Desulfovibrio Vulgaris Hildenborough at 1.04 Angstrom Resolution
Other atoms:
Fe (14);
Cl (1);
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5jt1 (Ni: 1) - The 3D Structure of Ni-Reconstituted U489C Variant of [Nifese] Hydrogenase From Desulfovibrio Vulgaris Hildenborough in the Oxidized State at 1.35 Angstrom Resolution
Other atoms:
Fe (18);
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5k4l (Ni: 2) - Crystal Structure of KDM5A in Complex with A Naphthyridone Inhibitor
Other atoms:
Zn (4);
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5k7h (Ni: 1) - Crystal Structure of Aibr in Complex with the Effector Molecule Isovaleryl Coenzyme A
Other atoms:
Cl (4);
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5kd8 (Ni: 2) - BT_4244 Metallopeptidase in Complex with Tn Antigen.
Other atoms:
Zn (1);
Na (2);
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5ke1 (Ni: 1) - Structure of A C-Terminal Fragment of the Icsa/Virg Passenger-Domain
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5lfz (Ni: 1) - T48 Deacetylase
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5lhs (Ni: 4) - The Ligand Free Catalytic Domain of Murine Urokinase-Type Plasminogen Activator
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5lmm (Ni: 2) - Structure of E Coli Hydrogenase Hyd-1 Mutant E28Q
Other atoms:
Mg (2);
Fe (26);
Cl (3);
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5ln5 (Ni: 2) - Crystal Structure of the WSS1 E203Q Mutant From S. Pombe
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5lne (Ni: 1) - E. Coli F9 Pilus Adhesin Fmlh Bound to the Thomsen-Friedenreich (Tf) Antigen
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5lry (Ni: 2) - E Coli [Nife] Hydrogenase Hyd-1 Mutant E28D
Other atoms:
Mg (2);
Fe (24);
Cl (2);
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5ltw (Ni: 3) - Complex of Human 14-3-3 Sigma CLU1 Mutant with Phosphorylated Heat Shock Protein B6
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5lu3 (Ni: 1) - The Structure of Spirochaeta Thermophila CBM64
Other atoms:
Ca (2);
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5ly1 (Ni: 4) - JMJD2A/ KDM4A Complexed with Ni(II) and Macrocyclic Peptide Inhibitor CP2 (13-Mer)
Other atoms:
Cl (3);
Zn (4);
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5ly2 (Ni: 4) - JMJD2A/ KDM4A Complexed with Ni(II), Nog and Macrocyclic Peptide Inhibitor CP2_R6KME3 (13-Mer)
Other atoms:
Cl (5);
Zn (4);
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5m68 (Ni: 11) - At-Rich Dna Dodecamer with Extra Helical Guanine-Nickel Coordination
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5m7m (Ni: 7) - Novel Imidazo[1,2-A]Pyridine Derivatives with Potent Autotaxin/ENPP2 Inhibitor Activity
Other atoms:
F (1);
K (1);
Zn (4);
I (1);
Cl (2);
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5mdj (Ni: 1) - Crystal Structure of An O2-Tolerant [Nife]-Hydrogenase From Ralstonia Eutropha in A Its As-Isolated High-Pressurized Form
Other atoms:
Mg (1);
Fe (12);
Cl (1);
Page generated: Wed Nov 13 13:14:05 2024
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