Nickel in PDB, part 60 (files: 2361-2400),
PDB 8ysv-9gyb
Experimental structures of coordination spheres of Nickel (Ni) in bioorganic
molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius
around Nickel atoms. PDB files: 2361-2400 (PDB 8ysv-9gyb).
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8ysv (Ni: 1) - Crystal Structure of Beta - Glucosidase 6PG From Enterococcus Faecalis
Other atoms:
Na (2);
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8zak (Ni: 2) - Crystal Structure of the Channel Protein Cora From Campylobacter Jejuni in Complex with NI2+
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8zvg (Ni: 5) - Crystal Structure of Aetd in Complex with L-Tyrosine
Other atoms:
Fe (2);
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8zvh (Ni: 5) - Crystal Structure of Aetd in Complex with L-Phenylalanine
Other atoms:
Fe (2);
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8zxr (Ni: 1) - Crystal Structure of SSR1698 in Complex with Heme C
Other atoms:
Cl (2);
Fe (1);
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9ant (Ni: 1) - Antennapedia Homeodomain-Dna Complex
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9atm (Ni: 1) - Sars-Cov-2 Eg.5 Rbd Bound to the Vir-7229 and the S2H97 Fab Fragments
Other atoms:
Cl (1);
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9axn (Ni: 2) - Crystal Structure of Anti-Fentanyl Antibody HY11-6B2_MU Fab in Complex with Fentanyl
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9ayn (Ni: 5) - Mycolicibacterium Smegmatis Clps with Bound NI2+
Other atoms:
Mg (2);
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9ayo (Ni: 5) - Mycolicibacterium Smegmatis Clps with Bound Pheala and NI2+
Other atoms:
Mg (2);
-
9az5 (Ni: 1) - Mycolicibacterium Smegmatis Clps with Bound MG2+
Other atoms:
Mg (5);
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9b06 (Ni: 3) - Mycolicibacterium Smegmatis Clps with Leuthr Dipeptide and MG2+
Other atoms:
Mg (2);
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9b10 (Ni: 1) - Mycolicibacterium Smegmatis Clps with Tyrarg Dipeptide and MG2+
Other atoms:
Mg (5);
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9b1p (Ni: 3) - Mycolicibacterium Smegmatis Clps with Trpser Dipeptide and MG2+
Other atoms:
Mg (4);
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9bkx (Ni: 33) - Mycobacterium Tuberculosis Encapsulin in Complex with Dyp
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9c0q (Ni: 2) - Carbon Monoxide Dehydrogenase (Codh) From Methanosarcina Thermophila, Specimen Prepared on Blot Plunger
Other atoms:
Fe (36);
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9c0r (Ni: 2) - Carbon Monoxide Dehydrogenase (Codh) From Methanosarcina Thermophila, Specimen Prepared on Chameleon Plunger
Other atoms:
Fe (36);
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9c0s (Ni: 4) - Carbon Monoxide Dehydrogenase/Acetyl-Coa Synthase (Codh/Acs) Pentamer From Methanosarcina Thermophila
Other atoms:
Fe (43);
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9c0t (Ni: 6) - Carbon Monoxide Dehydrogenase/Acetyl-Coa Synthase (Codh/Acs) Hexamer From Methanosarcina Thermophila
Other atoms:
Fe (44);
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9d4i (Ni: 1) - Crystal Structure of Ni(II)-Bound Polysaccharide Deacetylase From Bacteroides Ovatus
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9ecn (Ni: 2) - M. Acetivorans Mcr Containing A 2-Methylglutamine Modification
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9eia (Ni: 2) - A Broad-Substrate Spectrum Lactate Racemase A From Isosphaera Pallida in Complex with Copurified D-Lactate
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9eid (Ni: 1) - A Broad-Substrate Spectrum Lactate Racemase A From Isosphaera Pallida in Complex with D-2-Hydroxybutyrate
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9eif (Ni: 2) - A Broad-Substrate Spectrum Lactate Racemase A From Isosphaera Pallida in Complex with D-2-Hydroxyisovalerate
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9fek (Ni: 12) - Crystal Structure of Guanidinase From Nitrospira Inopinata
Other atoms:
Mn (12);
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9fyn (Ni: 2) - Lacto-N-Biosidase From Trueperella Pyogenes
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9fyo (Ni: 3) - Lacto-N-Biosidase From Trueperella Pyogenes
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9fzy (Ni: 4) - Structure of Carbon Monoxide Dehydrogenase/Acetyl-Coa Synthase (Codh/Acs) in Complex with Corrinoid Iron-Sulfur Protein (Cofesp) From Clostridium Autoethanogenum (Composite Structure, Class 3A)
Other atoms:
Co (1);
Fe (28);
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9fzz (Ni: 4) - Structure of Carbon Monoxide Dehydrogenase/Acetyl-Coa Synthase (Codh/Acs) in Complex with Corrinoid Iron-Sulfur Protein (Cofesp) From Clostridium Autoethanogenum (Composite Structure, Class 3B)
Other atoms:
Fe (28);
Co (1);
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9g00 (Ni: 4) - Structure of Carbon Monoxide Dehydrogenase/Acetyl-Coa Synthase (Codh/Acs) in Complex with Corrinoid Iron-Sulfur Protein (Cofesp) From Clostridium Autoethanogenum (Composite Structure, Class 3CB)
Other atoms:
Co (1);
Fe (28);
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9g01 (Ni: 4) - Structure of Carbon Monoxide Dehydrogenase/Acetyl-Coa Synthase (Codh/Acs) From Clostridium Autoethanogenum (Composite Structure, Closed and Co-Bound State)
Other atoms:
Fe (24);
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9g02 (Ni: 4) - Structure of Carbon Monoxide Dehydrogenase/Acetyl-Coa Synthase (Codh/Acs) From Clostridium Autoethanogenum (Composite Structure, Semi-Extended State)
Other atoms:
Fe (24);
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9g03 (Ni: 2) - Structure of Carbon Monoxide Dehydrogenase/Acetyl-Coa Synthase (Codh/Acs) in Complex with Ferredoxin (Clostridium Autoethanogenum)
Other atoms:
Fe (28);
-
9g7i (Ni: 6) - Structure of Carbon Monoxide Dehydrogenase/Acetyl-Coa Synthase (Codh/Acs) in Complex with Acetyl-Coenyzme A From Clostridium Autoethanogenum
Other atoms:
Fe (28);
Cl (8);
Ca (10);
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9gle (Ni: 2) - Jumonji Domain-Containing Protein 2A with Crystallization Epitope Mutations A91T:T93S
Other atoms:
Zn (2);
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9gof (Ni: 6) - Mnca Bound to Nickel
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9gp1 (Ni: 4) - Jumonji Domain-Containing Protein 2A with Crystallization Epitope Mutatios K330R:A334E
Other atoms:
Zn (4);
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9gyb (Ni: 6) - Crystal Structure of the Recombinant Codh From Rhodopspirillum Rubrum Produced in Escherichia Coli
Other atoms:
Na (1);
Fe (60);
Page generated: Tue Feb 25 11:46:39 2025
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