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Nickel in PDB, part 53 (files: 2081-2120), PDB 6z8j-7jgp

Experimental structures of coordination spheres of Nickel (Ni) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Nickel atoms. PDB files: 2081-2120 (PDB 6z8j-7jgp).
  1. 6z8j (Ni: 2) - Structure of [Nifese] Hydrogenase From Desulfovibrio Vulgaris Hildenborough Pressurized with Oxygen Gas - Structure WTO2
    Other atoms: Fe (36); Cl (2);
  2. 6z8m (Ni: 2) - Structure of [Nifese] Hydrogenase G491S Variant From Desulfovibrio Vulgaris Hildenborough Pressurized with Oxygen Gas - Structure G491S- O2
    Other atoms: Fe (18); Cl (1);
  3. 6z8o (Ni: 2) - Structure of [Nifese] Hydrogenase G491A Variant From Desulfovibrio Vulgaris Hildenborough Pressurized with Krypton Gas - Structure G491A-Kr
    Other atoms: Kr (20); Fe (36); Cl (2);
  4. 6z9g (Ni: 4) - Structure of [Nifese] Hydrogenase G491A Variant From Desulfovibrio Vulgaris Hildenborough Pressurized with Oxygen Gas - Structure G491A- O2
    Other atoms: Fe (72); Cl (4);
  5. 6z9o (Ni: 1) - Structure of [Nifese] Hydrogenase G491S Variant From Desulfovibrio Vulgaris Hildenborough Pressurized with Oxygen Gas - Structure G491A- O2-Ld
    Other atoms: Fe (18);
  6. 6za1 (Ni: 1) - Structure of [Nifese] Hydrogenase G491A Variant From Desulfovibrio Vulgaris Hildenborough Pressurized with Oxygen Gas - Structure G491A- O2-Hd
    Other atoms: Fe (18);
  7. 6zdc (Ni: 1) - Structure of the Catalytic Domain of Human Endo-Alpha-Mannosidase Manea in Complex with Nickel
  8. 6zja (Ni: 24) - Helicobacter Pylori Urease with Inhibitor Bound in the Active Site
  9. 6zyk (Ni: 1) - Non-Heme Monooxygenase, Thoj-Ni Complex
  10. 7a1f (Ni: 2) - Crystal Structure of Human 5' Exonuclease Appollo in Complex with 5'Damp
    Other atoms: Fe (2);
  11. 7a9m (Ni: 2) - Ni-Substituted Keggin Silicotungstate with Covalent Bond to Proteinase K
    Other atoms: W (22); Si (2);
  12. 7ad5 (Ni: 3) - Crystal Structure of the Effector AVRLM5-9 From Leptosphaeria Maculans
  13. 7afs (Ni: 1) - The Structure of Artemis Variant D37A
    Other atoms: Zn (1);
  14. 7apv (Ni: 1) - Structure of Artemis/DCLRE1C/SNM1C in Complex with Ceftriaxone
    Other atoms: Zn (1);
  15. 7apz (Ni: 1) - Clip Peptide Bound to Chicken Mhc Class II Molecule (Bl-2) From B2 Haplotype with A Decamer Mode of Binding
    Other atoms: Zn (10);
  16. 7as6 (Ni: 2) - 2.0 Angstrom Structure of Plant Extended Synaptotagmin 1, C2A Domain
    Other atoms: Cd (2); Cl (1);
  17. 7b1s (Ni: 2) - Crystal Structure of the Ethyl-Coenzyme M Reductase From Candidatus Ethanoperedens Thermophilum at 0.994-A Resolution
    Other atoms: K (4); Cl (6); Mn (1);
  18. 7b2c (Ni: 2) - Crystal Structure of the Ethyl-Coenzyme M Reductase From Candidatus Ethanoperedens Thermophilum Gassed with Xenon
    Other atoms: Mg (1); K (17); Xe (16); Cl (5); Na (5);
  19. 7b2h (Ni: 2) - Crystal Structure of the Methyl-Coenzyme M Reductase From Methanothermobacter Marburgensis Derivatized with Xenon
    Other atoms: Mg (15); Xe (12); K (4); Cl (2);
  20. 7b2x (Ni: 1) - Crystal Structure of Human 5' Exonuclease Appollo H61Y Variant
  21. 7b9b (Ni: 1) - Crystal Structure of Human 5' Exonuclease Appollo Apo Form
  22. 7c3a (Ni: 1) - Ferredoxin Reductase in Carbazole 1,9A-Dioxygenase
    Other atoms: Fe (6); I (3); Cl (10);
  23. 7c3b (Ni: 1) - Ferredoxin Reductase in Carbazole 1,9A-Dioxygenase (Fad Apo Form)
    Other atoms: Cl (18); I (3); Fe (6);
  24. 7cl2 (Ni: 6) - The Crystal Structure of Kanj
  25. 7cl3 (Ni: 6) - The Crystal Structure of Kanj in Complex with Kanamycin B
  26. 7cl4 (Ni: 6) - The Crystal Structure of Kanj in Complex with N-Oxalylglycine
  27. 7cl5 (Ni: 6) - The Crystal Structure of Kanj in Complex with Kanamycin B and N- Oxalylglycine
  28. 7cl6 (Ni: 6) - The Crystal Structure of Kanj in Complex with Neamine and N- Oxalylglycine
  29. 7cm4 (Ni: 2) - Crystal Structure of Covid-19 Virus Spike Receptor-Binding Domain Complexed with A Neutralizing Antibody Ct-P59
  30. 7cpc (Ni: 6) - His-Mediated Reversible Self-Assembly of Ferritin Nanocage with Ni Binding
    Other atoms: Fe (6);
  31. 7cpk (Ni: 2) - Xylanase R From Bacillus Sp. Tar-1
    Other atoms: Ca (3);
  32. 7cpl (Ni: 2) - Xylanase R From Bacillus Sp. Tar-1
    Other atoms: Ca (4);
  33. 7cxz (Ni: 1) - Crystal Structure of PCO2
    Other atoms: Fe (1);
  34. 7d2b (Ni: 1) - Crystal Structure of Ixodes Scapularis Glutaminyl Cyclase with A Ni Ion Bound to the Active Site
  35. 7dgl (Ni: 2) - The Ni-Bound Dimeric Structure of K78H/G80A/H82A Myoglobin
    Other atoms: Fe (2);
  36. 7dh6 (Ni: 2) - Crystal Structure of PLRG1
    Other atoms: Ca (3);
  37. 7fbw (Ni: 1) - Acetylxylan Esterase From Caldanaerobacter Subterraneus Subsp. Tengcongensis
  38. 7jgk (Ni: 3) - Crystal Structure of the Ni-Bound Human Heavy-Chain Variant 122H-Delta C-Star with 2,5-Furandihyrdoxamate Collected at 100K
    Other atoms: Na (1);
  39. 7jgo (Ni: 3) - Crystal Structure of the Ni-Bound Human Heavy-Chain Variant 122H-Delta C-Star with 2,5-Furandihyrdoxamate Collected at 278K
    Other atoms: Na (1);
  40. 7jgp (Ni: 3) - Crystal Structure of the Ni-Bound Human Heavy-Chain Variant 122H-Delta C-Star with 2,5-Furandihyrdoxamate at 318K
    Other atoms: Na (1);
Page generated: Fri Dec 24 10:00:53 2021

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