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Nickel in PDB, part 17 (files: 641-680), PDB 3u4s-446d

Experimental structures of coordination spheres of Nickel (Ni) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Nickel atoms. PDB files: 641-680 (PDB 3u4s-446d).
  1. 3u4s (Ni: 2) - Histone Lysine Demethylase JMJD2A in Complex with T11C Peptide Substrate Crosslinked to N-Oxalyl-D-Cysteine
    Other atoms: Zn (2);
  2. 3u78 (Ni: 1) - E67-2 Selectively Inhibits KIAA1718, A Human Histone H3 Lysine 9 Jumonji Demethylase
    Other atoms: Cl (1);
  3. 3u8v (Ni: 1) - Three Dimensional Structure of the Small Metal Binding Protein, Smbp
  4. 3ubp (Ni: 2) - Diamidophosphate Inhibited Bacillus Pasteurii Urease
  5. 3ugv (Ni: 2) - Crystal Structure of An Enolase From Alpha Pretobacterium BAL199 (Efi Target Efi-501650) with Bound Mg
    Other atoms: Mg (16); Cl (3);
  6. 3um9 (Ni: 2) - Crystal Structure of the Defluorinating L-2-Haloacid Dehalogenase BPRO0530
  7. 3uqy (Ni: 2) - H2-Reduced Structure of E. Coli Hydrogenase-1
    Other atoms: Mg (2); Fe (24); Cl (5);
  8. 3usc (Ni: 2) - Crystal Structure of E. Coli Hydrogenase-1 in A Ferricyanide-Oxidized Form
    Other atoms: Mg (2); Fe (26); Cl (5);
  9. 3use (Ni: 2) - Crystal Structure of E. Coli Hydrogenase-1 in Its As-Isolated Form
    Other atoms: Mg (2); Fe (32); Cl (3);
  10. 3uyj (Ni: 2) - Crystal Structure of JMJD5 Catalytic Core Domain in Complex with Nickle and Alpha-Kg
  11. 3vcl (Ni: 4) - Crystal Structure of Hla-B7 with the Hcmv PP65 Peptide Rpherngftvl
  12. 3vj6 (Ni: 4) - Structure of the Mhc Class Ib Molecule Qa-1B
  13. 3vj9 (Ni: 1) - Crystal Structure of the Human Squalene Synthase
    Other atoms: Ca (1);
  14. 3vja (Ni: 2) - Crystal Structure of the Human Squalene Synthase
  15. 3wd7 (Ni: 9) - Type III Polyketide Synthase
  16. 3wqa (Ni: 1) - Acinetobacter Sp. Tol 5 Ataa Ydd-DALL3 Domains in C-Terminal Stalk Fused to GCN4 Adaptors (CSTALKC1II)
    Other atoms: Cl (1);
  17. 3wrq (Ni: 1) - Minute Virus of Mice Non-Structural Protein-1N-Terminal Nuclease Domain Reveals A Unique ZN2+ Coordination in the Active Site Pocket and Shows A Novel Mode of Dna Recognition at the Origin of Replication
  18. 3x2y (Ni: 3) - Crystal Structure of Metallo-Beta-Lactamase H8A From Thermotoga Maritima
  19. 3x2z (Ni: 6) - Crystal Structure of Metallo-Beta-Lactamase in Complex with Nickel From Thermotoga Maritima
  20. 3x30 (Ni: 1) - Crystal Structure of Metallo-Beta-Lactamase From Thermotoga Maritima
    Other atoms: Mn (1);
  21. 3ze6 (Ni: 1) - 3D Structure of the Ni-Fe-Se Hydrogenase From D. Vulgaris Hildenborough in the As-Isolated Oxidized State at 1.50 Angstroms
    Other atoms: Fe (18); Cl (1);
  22. 3ze7 (Ni: 1) - 3D Structure of the Ni-Fe-Se Hydrogenase From D. Vulgaris Hildenborough in the Reduced State at 1.95 Angstroms
    Other atoms: Fe (14);
  23. 3ze8 (Ni: 1) - 3D Structure of the Ni-Fe-Se Hydrogenase From D. Vulgaris Hildenborough in the Reduced State at 1.95 Angstroms
    Other atoms: Fe (14); Cl (1);
  24. 3ze9 (Ni: 1) - 3D Structure of the Nifese Hydrogenase From D. Vulgaris Hildenborough in the Oxidized As-Isolated State at 1.33 Angstroms
    Other atoms: Fe (14); Cl (1);
  25. 3zea (Ni: 1) - 3D Structure of the Nifese Hydrogenase From D. Vulgaris Hildenborough in the Reduced State at 1.82 Angstroms
    Other atoms: Fe (14);
  26. 3zez (Ni: 2) - Phage Dutpases Control Transfer of Virulence Genes By A Proto-Oncogenic G Protein-Like Mechanism.
    Other atoms: Mg (1);
  27. 3zf0 (Ni: 2) - Phage Dutpases Control Transfer of Virulence Genes By A Proto-Oncogenic G Protein-Like Mechanism.
  28. 3zf1 (Ni: 2) - Phage Dutpases Control Transfer of Virulence Genes By A Proto-Oncogenic G Protein-Like Mechanism.
  29. 3zf2 (Ni: 2) - Phage Dutpases Control Transfer of Virulence Genes By A Proto-Oncogenic G Protein-Like Mechanism.
  30. 3zf3 (Ni: 2) - Phage Dutpases Control Transfer of Virulence Genes By A Proto-Oncogenic G Protein-Like Mechanism.
  31. 3zf4 (Ni: 2) - Phage Dutpases Control Transfer of Virulence Genes By A Proto-Oncogenic G Protein-Like Mechanism.
    Other atoms: Mg (1);
  32. 3zf5 (Ni: 2) - Phage Dutpases Control Transfer of Virulence Genes By A Proto-Oncogenic G Protein-Like Mechanism.
    Other atoms: Mg (1);
  33. 3zf6 (Ni: 2) - Phage Dutpases Control Transfer of Virulence Genes By A Proto-Oncogenic G Protein-Like Mechanism.
  34. 3zfs (Ni: 1) - Cryo-Em Structure of the F420-Reducing Nife-Hydrogenase From A Methanogenic Archaeon with Bound Substrate
    Other atoms: Fe (18);
  35. 3zg1 (Ni: 4) - Ni-Bound Form of M123A Mutant of Cupriavidus Metallidurans CH34 Cnrxs
    Other atoms: Cl (2);
  36. 3zqw (Ni: 1) - Structure of CBM3B of Major Scaffoldin Subunit Scaa From Acetivibrio Cellulolyticus
    Other atoms: Ca (1);
  37. 3zr9 (Ni: 4) - Structure of New Delhi Metallo-Beta-Lactamase 1 (Ndm-1)
    Other atoms: Co (1); Zn (1); Cd (1);
  38. 3zu8 (Ni: 1) - Structure of CBM3B of Major Scaffoldin Subunit Scaa From Acetivibrio Cellulolyticus Determined on the Nikel Absorption Edge
    Other atoms: Ca (1);
  39. 3zuc (Ni: 1) - Tructure of CBM3B of Major Scaffoldin Subunit Scaa From Acetivibrio Cellulolyticus Determined From the Crystals Grown in the Presence of Nickel
    Other atoms: Ca (1);
  40. 446d (Ni: 9) - Structure of the Oligonucleotide D(Cgtatatacg) As A Site Specific Complex with Nickel Ions
Page generated: Sat Apr 3 17:58:01 2021

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