Nickel in PDB, part 17 (files: 641-680),
PDB 3u4s-446d
Experimental structures of coordination spheres of Nickel (Ni) in bioorganic
molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius
around Nickel atoms. PDB files: 641-680 (PDB 3u4s-446d).
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3u4s (Ni: 2) - Histone Lysine Demethylase JMJD2A in Complex with T11C Peptide Substrate Crosslinked to N-Oxalyl-D-Cysteine
Other atoms:
Zn (2);
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3u78 (Ni: 1) - E67-2 Selectively Inhibits KIAA1718, A Human Histone H3 Lysine 9 Jumonji Demethylase
Other atoms:
Cl (1);
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3u8v (Ni: 1) - Three Dimensional Structure of the Small Metal Binding Protein, Smbp
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3ubp (Ni: 2) - Diamidophosphate Inhibited Bacillus Pasteurii Urease
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3ugv (Ni: 2) - Crystal Structure of An Enolase From Alpha Pretobacterium BAL199 (Efi Target Efi-501650) with Bound Mg
Other atoms:
Mg (16);
Cl (3);
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3um9 (Ni: 2) - Crystal Structure of the Defluorinating L-2-Haloacid Dehalogenase BPRO0530
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3uqy (Ni: 2) - H2-Reduced Structure of E. Coli Hydrogenase-1
Other atoms:
Mg (2);
Fe (24);
Cl (5);
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3usc (Ni: 2) - Crystal Structure of E. Coli Hydrogenase-1 in A Ferricyanide-Oxidized Form
Other atoms:
Mg (2);
Fe (26);
Cl (5);
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3use (Ni: 2) - Crystal Structure of E. Coli Hydrogenase-1 in Its As-Isolated Form
Other atoms:
Mg (2);
Fe (32);
Cl (3);
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3uyj (Ni: 2) - Crystal Structure of JMJD5 Catalytic Core Domain in Complex with Nickle and Alpha-Kg
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3vcl (Ni: 4) - Crystal Structure of Hla-B7 with the Hcmv PP65 Peptide Rpherngftvl
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3vj6 (Ni: 4) - Structure of the Mhc Class Ib Molecule Qa-1B
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3vj9 (Ni: 1) - Crystal Structure of the Human Squalene Synthase
Other atoms:
Ca (1);
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3vja (Ni: 2) - Crystal Structure of the Human Squalene Synthase
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3wd7 (Ni: 9) - Type III Polyketide Synthase
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3wqa (Ni: 1) - Acinetobacter Sp. Tol 5 Ataa Ydd-DALL3 Domains in C-Terminal Stalk Fused to GCN4 Adaptors (CSTALKC1II)
Other atoms:
Cl (1);
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3wrq (Ni: 1) - Minute Virus of Mice Non-Structural Protein-1N-Terminal Nuclease Domain Reveals A Unique ZN2+ Coordination in the Active Site Pocket and Shows A Novel Mode of Dna Recognition at the Origin of Replication
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3x2y (Ni: 3) - Crystal Structure of Metallo-Beta-Lactamase H8A From Thermotoga Maritima
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3x2z (Ni: 6) - Crystal Structure of Metallo-Beta-Lactamase in Complex with Nickel From Thermotoga Maritima
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3x30 (Ni: 1) - Crystal Structure of Metallo-Beta-Lactamase From Thermotoga Maritima
Other atoms:
Mn (1);
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3ze6 (Ni: 1) - 3D Structure of the Ni-Fe-Se Hydrogenase From D. Vulgaris Hildenborough in the As-Isolated Oxidized State at 1.50 Angstroms
Other atoms:
Fe (18);
Cl (1);
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3ze7 (Ni: 1) - 3D Structure of the Ni-Fe-Se Hydrogenase From D. Vulgaris Hildenborough in the Reduced State at 1.95 Angstroms
Other atoms:
Fe (14);
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3ze8 (Ni: 1) - 3D Structure of the Ni-Fe-Se Hydrogenase From D. Vulgaris Hildenborough in the Reduced State at 1.95 Angstroms
Other atoms:
Fe (14);
Cl (1);
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3ze9 (Ni: 1) - 3D Structure of the Nifese Hydrogenase From D. Vulgaris Hildenborough in the Oxidized As-Isolated State at 1.33 Angstroms
Other atoms:
Fe (14);
Cl (1);
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3zea (Ni: 1) - 3D Structure of the Nifese Hydrogenase From D. Vulgaris Hildenborough in the Reduced State at 1.82 Angstroms
Other atoms:
Fe (14);
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3zez (Ni: 2) - Phage Dutpases Control Transfer of Virulence Genes By A Proto-Oncogenic G Protein-Like Mechanism.
Other atoms:
Mg (1);
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3zf0 (Ni: 2) - Phage Dutpases Control Transfer of Virulence Genes By A Proto-Oncogenic G Protein-Like Mechanism.
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3zf1 (Ni: 2) - Phage Dutpases Control Transfer of Virulence Genes By A Proto-Oncogenic G Protein-Like Mechanism.
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3zf2 (Ni: 2) - Phage Dutpases Control Transfer of Virulence Genes By A Proto-Oncogenic G Protein-Like Mechanism.
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3zf3 (Ni: 2) - Phage Dutpases Control Transfer of Virulence Genes By A Proto-Oncogenic G Protein-Like Mechanism.
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3zf4 (Ni: 2) - Phage Dutpases Control Transfer of Virulence Genes By A Proto-Oncogenic G Protein-Like Mechanism.
Other atoms:
Mg (1);
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3zf5 (Ni: 2) - Phage Dutpases Control Transfer of Virulence Genes By A Proto-Oncogenic G Protein-Like Mechanism.
Other atoms:
Mg (1);
-
3zf6 (Ni: 2) - Phage Dutpases Control Transfer of Virulence Genes By A Proto-Oncogenic G Protein-Like Mechanism.
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3zfs (Ni: 1) - Cryo-Em Structure of the F420-Reducing Nife-Hydrogenase From A Methanogenic Archaeon with Bound Substrate
Other atoms:
Fe (18);
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3zg1 (Ni: 4) - Ni-Bound Form of M123A Mutant of Cupriavidus Metallidurans CH34 Cnrxs
Other atoms:
Cl (2);
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3zqw (Ni: 1) - Structure of CBM3B of Major Scaffoldin Subunit Scaa From Acetivibrio Cellulolyticus
Other atoms:
Ca (1);
-
3zr9 (Ni: 4) - Structure of New Delhi Metallo-Beta-Lactamase 1 (Ndm-1)
Other atoms:
Co (1);
Zn (1);
Cd (1);
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3zu8 (Ni: 1) - Structure of CBM3B of Major Scaffoldin Subunit Scaa From Acetivibrio Cellulolyticus Determined on the Nikel Absorption Edge
Other atoms:
Ca (1);
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3zuc (Ni: 1) - Tructure of CBM3B of Major Scaffoldin Subunit Scaa From Acetivibrio Cellulolyticus Determined From the Crystals Grown in the Presence of Nickel
Other atoms:
Ca (1);
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446d (Ni: 9) - Structure of the Oligonucleotide D(Cgtatatacg) As A Site Specific Complex with Nickel Ions
Page generated: Thu Dec 28 11:52:57 2023
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