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Nickel in PDB, part 52 (files: 2041-2080), PDB 6wgq-9ant

Experimental structures of coordination spheres of Nickel (Ni) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Nickel atoms. PDB files: 2041-2080 (PDB 6wgq-9ant).
  1. 6wgq (Ni: 5) - The Crystal Structure of A Beta-Lactamase From Shigella Flexneri 2A Str. 2457T
    Other atoms: Cl (4);
  2. 6wza (Ni: 1) - Ni-Bound Structure of An Engineered Metal-Dependent Protein Trimer, TRICYT1
    Other atoms: Fe (3); Cl (6); Na (5);
  3. 6wzc (Ni: 2) - Ni-Bound Structure of An Engineered Protein Trimer, TRICYT3
    Other atoms: Fe (1); Ca (4); Cl (3);
  4. 6x1h (Ni: 1) - Crystal Structure of A Guanine Nucleotide Exchange Factor (Gef) Domain From the Orientia Tsutsugamushi Protein Otdub
  5. 6x5e (Ni: 3) - Crystal Structure of A Lewis-Binding Fab (CH88.2)
  6. 6x5k (Ni: 12) - Crystal Structure of Codh/Acs with Carbon Monoxide Bound to the A- Cluster
    Other atoms: Mg (1); Fe (56);
  7. 6xte (Ni: 2) - Human Karyopherin RANBP5 (Isoform-1)
    Other atoms: Cl (1);
  8. 6xu2 (Ni: 1) - Human Karyopherin RANBP5 (Isoform-3)
  9. 6xvw (Ni: 6) - Catalytic Domain of Human Parp-1 in Complex with the Inhibitor MC2050
  10. 6xx4 (Ni: 1) - Crystal Structure of the C-Src SH3 Domain H122R-Q128E Mutant in Complex with Ni(II) at pH 7.5 Co-Crystallized with Methyl Beta- Cyclodextrin
  11. 6xx5 (Ni: 1) - Crystal Structure of the C-Src SH3 Domain H122R-Q128K Mutant in Complex with Ni(II) at pH 7.5 Co-Crystallized with Methyl Beta- Cyclodextrin
  12. 6y8y (Ni: 1) - Structure of Baltic Herring (Clupea Harengus) Phosphoglucomutase 5 (PGM5) with Bound Glucose-1-Phosphate
    Other atoms: Ca (1); Na (5);
  13. 6y8z (Ni: 1) - Structure of Baltic Herring (Clupea Harengus) Phosphoglucomutase 5 (PGM5)
    Other atoms: Ca (1); Na (4);
  14. 6yoa (Ni: 1) - Lig V 1 Structure and the Inflammatory Response to the Ole E 1 Protein Family
  15. 6ytt (Ni: 6) - Co-Dehydrogenase/Acetyl-Coa Synthase (Codh/Acs) From Clostridium Autoethanogenum at 3.0-A Resolution
    Other atoms: F (9); Fe (28); Na (6);
  16. 6yu9 (Ni: 4) - Co-Dehydrogenase Homodimer From Clostridium Autoethanogenum at 1.90-A Resolution
    Other atoms: Fe (40); Cl (1);
  17. 6yua (Ni: 2) - Co-Dehydrogenase Coupled to the N-Terminal Domain of the Acetyl-Coa Synthase From Clostridium Autoethanogenum Isolated After Tryptic Digestion.
    Other atoms: Mg (4); Fe (20);
  18. 6z7r (Ni: 2) - Structure of [Nifese] Hydrogenase From Desulfovibrio Vulgaris Hildenborough Pressurized with Krypton Gas - Structure WTKR1
    Other atoms: Kr (42); Fe (36); Cl (2);
  19. 6z8j (Ni: 2) - Structure of [Nifese] Hydrogenase From Desulfovibrio Vulgaris Hildenborough Pressurized with Oxygen Gas - Structure WTO2
    Other atoms: Fe (36); Cl (2);
  20. 6z8m (Ni: 2) - Structure of [Nifese] Hydrogenase G491S Variant From Desulfovibrio Vulgaris Hildenborough Pressurized with Oxygen Gas - Structure G491S- O2
    Other atoms: Fe (18); Cl (1);
  21. 6z8o (Ni: 2) - Structure of [Nifese] Hydrogenase G491A Variant From Desulfovibrio Vulgaris Hildenborough Pressurized with Krypton Gas - Structure G491A-Kr
    Other atoms: Kr (20); Fe (36); Cl (2);
  22. 6z9g (Ni: 4) - Structure of [Nifese] Hydrogenase G491A Variant From Desulfovibrio Vulgaris Hildenborough Pressurized with Oxygen Gas - Structure G491A- O2
    Other atoms: Fe (72); Cl (4);
  23. 6z9o (Ni: 1) - Structure of [Nifese] Hydrogenase G491S Variant From Desulfovibrio Vulgaris Hildenborough Pressurized with Oxygen Gas - Structure G491A- O2-Ld
    Other atoms: Fe (18);
  24. 6za1 (Ni: 1) - Structure of [Nifese] Hydrogenase G491A Variant From Desulfovibrio Vulgaris Hildenborough Pressurized with Oxygen Gas - Structure G491A- O2-Hd
    Other atoms: Fe (18);
  25. 6zdc (Ni: 1) - Structure of the Catalytic Domain of Human Endo-Alpha-Mannosidase Manea in Complex with Nickel
  26. 6zyk (Ni: 1) - Non-Heme Monooxygenase, Thoj-Ni Complex
  27. 7afs (Ni: 1) - The Structure of Artemis Variant D37A
    Other atoms: Zn (1);
  28. 7cpk (Ni: 2) - Xylanase R From Bacillus Sp. Tar-1
    Other atoms: Ca (3);
  29. 7cpl (Ni: 2) - Xylanase R From Bacillus Sp. Tar-1
    Other atoms: Ca (4);
  30. 7cxz (Ni: 1) - Crystal Structure of PCO2
    Other atoms: Fe (1);
  31. 7dh6 (Ni: 2) - Crystal Structure of PLRG1
    Other atoms: Ca (3);
  32. 7jgk (Ni: 3) - Crystal Structure of the Ni-Bound Human Heavy-Chain Variant 122H-Delta C-Star with 2,5-Furandihyrdoxamate Collected at 100K
    Other atoms: Na (1);
  33. 7jgo (Ni: 3) - Crystal Structure of the Ni-Bound Human Heavy-Chain Variant 122H-Delta C-Star with 2,5-Furandihyrdoxamate Collected at 278K
    Other atoms: Na (1);
  34. 7jgp (Ni: 3) - Crystal Structure of the Ni-Bound Human Heavy-Chain Variant 122H-Delta C-Star with 2,5-Furandihyrdoxamate at 318K
    Other atoms: Na (1);
  35. 7jgq (Ni: 3) - Crystal Structure of the Ni-Bound Human Heavy-Chain Variant 122H-Delta C-Star with 2,5-Furandihyrdoxamate Collected at 278K After One Heating/Cooling Cycle
    Other atoms: Na (1);
  36. 7jw4 (Ni: 2) - Crystal Structure of PDGH110B in Complex with D-Galactose
    Other atoms: Cl (2);
  37. 8icl (Ni: 2) - Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed with Seven Base Pairs of Dna; Soaked in the Presence of Datp (1 Millimolar) and NICL2 (5 Millimolar)
    Other atoms: Na (2);
  38. 9ant (Ni: 1) - Antennapedia Homeodomain-Dna Complex
Page generated: Thu Dec 17 13:19:41 2020

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